Bacillus velezensis UCMB5033: RBAU_3560
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Entry
RBAU_3560 CDS
T02795
Symbol
rho
Name
(GenBank) transcriptional terminator Rho
KO
K03628
transcription termination factor Rho
Organism
bama
Bacillus velezensis UCMB5033
Pathway
bama03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bama00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBAU_3560 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bama03021
]
RBAU_3560 (rho)
03019 Messenger RNA biogenesis [BR:
bama03019
]
RBAU_3560 (rho)
Transcription machinery [BR:
bama03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RBAU_3560 (rho)
Messenger RNA biogenesis [BR:
bama03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RBAU_3560 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
ATPase_2
NACHT
AAA_22
AAA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CDG31526
LinkDB
All DBs
Position
complement(3685976..3687262)
Genome browser
AA seq
428 aa
AA seq
DB search
MKDVSISSLENMKLKELYELARHYKISYYSKLTKKELIFAILKANAEQEDLLFMEGVLEI
IQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVEA
VNGDDPESAKERVHFPALTPLYPDRQMVLETKPNYLSTRILDMMAPVGFGQRGLIVAPPK
AGKTMLLKEIANSITTNQPDAELIVLLIDERPEEVTDIERSVAGDVVSSTFDEVPENHIK
VAELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIR
RSGTRKEELLVPKEHLDRLWAIRKSMSDSPDFAEKFMRKMKKTKTNQEFFDLINQEWKQA
NLSSSARR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgtatctatttcctctttggaaaatatgaaattaaaagaactatatgaactg
gccagacattataaaatctcctactacagcaaactgactaaaaaagaattaatctttgcc
attctgaaagccaacgccgagcaggaggatcttctgtttatggaaggcgtgctcgaaatc
atccaatcggaaggattcggcttcctcagaccgattaattactcgccaagctcagaagac
atctacatttctgcttcccagatccgccgctttgatttaagaaacggtgacaaagtatcc
ggcaaggtgcgtccgccgaaagaaaacgaacgctattacggacttttgcacgttgaagcg
gtaaatggagacgatccggaatctgcgaaggagcgcgtccattttcctgcgctgactccg
ctttatccggaccgccaaatggtgcttgagacgaaaccgaattatctctcaacaagaatt
ctcgatatgatggctcccgtcggtttcggccagcgcggtctgatcgtggcgccgccgaaa
gccggtaaaaccatgctgttgaaagaaatcgctaacagcattacgacaaatcagcctgac
gctgaattgatcgttctcttaattgatgaaagaccggaagaagtaacggatattgaacgt
tccgtagcgggcgatgtcgtcagctcgacgttcgatgaagtgccggaaaatcacattaag
gtagcggagcttgtgcttgaacgggcgatgcgtctcgttgaacataaaaaagacgttatc
attctgatggacagcattacccgcctggcacgggcctacaacctcgttatcccgccaagc
ggacgtacgctttccggcgggattgacccggctgcgttccatcgtccgaagcgctttttc
ggtgccgcgagaaacattgaagagggcggcagtctgaccattttggcgacggcgctcgta
gacacgggctcccggatggatgacgtcatctatgaagagtttaaaggaacgggcaacatg
gagcttcaccttgaccgttctcttgcggaaagacggattttcccggcgatcgatatccgc
cgctccggcacacggaaggaagagctgctcgtgccgaaagagcatcttgaccgtctatgg
gcgatccgcaaatcgatgtctgattctccggacttcgcagagaagtttatgagaaaaatg
aaaaaaacaaaaacgaatcaggaattcttcgatctgatcaaccaagaatggaagcaggca
aacctttcatcatcagcccgccgctga
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