Bacillus velezensis NAU-B3: BAPNAU_1087
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Entry
BAPNAU_1087 CDS
T02859
Symbol
yrvE
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bamb
Bacillus velezensis NAU-B3
Pathway
bamb03410
Base excision repair
bamb03430
Mismatch repair
bamb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BAPNAU_1087 (yrvE)
03430 Mismatch repair
BAPNAU_1087 (yrvE)
03440 Homologous recombination
BAPNAU_1087 (yrvE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamb03400
]
BAPNAU_1087 (yrvE)
DNA repair and recombination proteins [BR:
bamb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BAPNAU_1087 (yrvE)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BAPNAU_1087 (yrvE)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BAPNAU_1087 (yrvE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
PGM_PMM_II
Motif
Other DBs
NCBI-ProteinID:
CDH94868
LinkDB
All DBs
Position
1162325..1164685
Genome browser
AA seq
786 aa
AA seq
DB search
MLASKMRWEIQQPDQEKVKSLTEQLDITPLVASLLVKRGFDTAESARLFLHTKDADFYDP
YELKGMREAVDRIKLAVSQGEPIMIYGDYDADGVTSTSVMLTALRQLSADVDFYIPDRFT
EGYGPNEQAFRSIKERGFSLIITVDTGIAAVHEAEVAKELGLDVIITDHHEPGPELPDVF
AIIHPKQPGCGYPFKELAGVGVAFKLAHALTGSLPEAMLDLAAIGTVADLVPLHDENRLI
ASLGIERLRTTNRPGLKALIKLSGGDIGQADEETIGFQVAPRLNAVGRIEQADPAVHLLM
TEDQFEAEELASDIDLLNKERQKMVKTMTEEAVEMVQQQGGNPSAIVVAKAGWNPGVVGI
VASKLAERFYRPAVVLGIDEEQGIAKGSARSIRGFNLFTSLSQCRDILPHFGGHPMAAGM
TLKAEDVAELRDRLNQMAEETLTEEDFIPVQEVDLVCGVEDITVESITELNMLSPFGMLN
PKPHVMVKNAVLDDVRLIGANKNHVKMTVKSDSAVLDCVGFNKGELEAGVVPGSTISIVG
EMSINEWNNRKKPQLMIKDAAVPEWQLFDIRGKRTWEDTVTSLPKEKRVLISFNEKTAQK
LRAKELSGELAGITSESEAEALQLDGKYAVFLDVPPSADRLQHLLDGKKPERIYFVFINH
EEHFLSSFPSRNDFKWFYAFLLKRGAFDFGKHGSELARHRGWSIDTINFMTKVFFDLGFV
KIEDGVLSVVSGAKKRDLADSQTYQVKQQLMELDQKLNYSAAHELKEWLNKLMNQGSEAY
ESTRRT
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgtcaaaaatgcgctgggaaatccagcagccggatcaggaaaaagtcaaatca
ctcacagaacaattggacataacacctcttgtggcatcactgcttgtaaaaagaggtttt
gatactgccgaaagcgcaaggctgtttttacatacaaaggatgcagacttttatgacccg
tatgaattaaagggaatgcgggaagcagttgatcggataaaactggcggtttctcaaggg
gaaccgattatgatttacggagattacgatgcagacggcgttacaagcacgtcagtgatg
ctgacggcactcagacagctgtcggcggacgttgacttttatattcccgaccgtttcaca
gaaggctacggcccgaatgaacaagctttccgttccataaaagagcggggattttcgctg
atcattacagtggatacgggaatcgccgccgtccatgaagctgaagtcgcaaaagagctg
ggcttagacgtcattattaccgaccaccatgagccgggacccgagcttcctgacgtattt
gcgatcatccacccgaagcagccgggctgcggctatccgtttaaagaattggccggcgtc
ggtgtggcgtttaagcttgcccatgcgcttacgggttctttgccggaagctatgctggac
ttggcggcaatcggtacggttgcagatctggtgcctcttcatgatgaaaacagattaatt
gcgtcacttgggatcgaaaggcttcgaacgacaaatcggccgggcctcaaagctctgatt
aagctttccggcggagatatcggacaagctgatgaggaaacgatcggatttcaggtcgcg
ccgaggctcaatgccgtcggaagaatagaacaggccgatcccgccgtgcatctgctgatg
accgaagatcagtttgaagcggaggaactggcttcggatattgacctgctgaataaagag
cggcagaaaatggtgaaaaccatgaccgaagaggctgttgaaatggttcagcagcaaggc
ggaaacccgtctgccattgtagtggcaaaagccggctggaatccgggagtcgtcggtatt
gtcgcatcgaagctggctgaacgtttttaccggcccgctgttgtgcttgggatagatgag
gagcagggcatcgctaaagggtcggcgcgaagcatcagaggcttcaacctttttacgagc
ctttcacagtgcagagacattcttcctcatttcggcgggcatccgatggcggcaggaatg
acgttgaaggctgaagatgtggcggaattaagggacaggctgaatcaaatggctgaagaa
acccttacggaagaggattttattcccgttcaggaggttgatcttgtctgcggcgttgaa
gacataaccgttgaaagcattacagaattgaatatgctgtcgccgttcggcatgcttaac
cctaaaccgcatgtgatggtgaaaaatgccgtgcttgatgatgtgcgcctgatcggagcg
aataaaaatcacgtgaaaatgacggtgaaaagtgattccgccgtccttgactgcgtcggc
tttaacaaaggggagcttgaagccggagttgtccccggatcaacgatttccattgtcggc
gagatgtccattaatgaatggaacaacagaaagaaaccccagctgatgattaaagatgct
gcggtgccggaatggcagctttttgatatcaggggcaagcggacgtgggaagacacggtc
acctcgctgccgaaggaaaaacgggtgctcatcagctttaacgaaaaaaccgctcagaag
ctccgtgcaaaagagctgtcgggcgagctggccgggatcacatcggaatccgaggcggaa
gctctccagcttgacggaaaatatgccgtttttctggatgtgccgccgtcagcggatcgc
ctgcagcatttgcttgacggaaagaagccggaacggatttattttgtttttatcaatcat
gaagaacatttcctgtcctcatttccatcgcggaatgatttcaagtggttttacgcattt
ctcttaaaaaggggcgcttttgacttcggcaagcatggttcagagcttgcgagacacaga
ggatggtcaattgacacaatcaatttcatgacaaaggtgttttttgatctcggttttgtt
aaaatagaagatggtgtgctgtctgtcgtgagcggcgcgaaaaaacgcgacctggcagat
tcgcaaacctatcaggtaaaacagcagctgatggaattagaccagaagctcaattattcc
gcagcccatgagctgaaggaatggctgaataagctgatgaaccaaggttcagaagcttat
gaaagtacgaggaggacatag
DBGET
integrated database retrieval system
