Bacillus velezensis NAU-B3: BAPNAU_1194
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Entry
BAPNAU_1194 CDS
T02859
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bamb
Bacillus velezensis NAU-B3
Pathway
bamb03030
DNA replication
bamb03430
Mismatch repair
bamb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAPNAU_1194 (holA)
03430 Mismatch repair
BAPNAU_1194 (holA)
03440 Homologous recombination
BAPNAU_1194 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bamb03032
]
BAPNAU_1194 (holA)
03400 DNA repair and recombination proteins [BR:
bamb03400
]
BAPNAU_1194 (holA)
Enzymes [BR:
bamb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BAPNAU_1194 (holA)
DNA replication proteins [BR:
bamb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BAPNAU_1194 (holA)
DNA repair and recombination proteins [BR:
bamb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BAPNAU_1194 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DUF4704
V-ATPase_G_2
DNA_pol3_gamma3
DUF1319
Motif
Other DBs
NCBI-ProteinID:
CDH94975
LinkDB
All DBs
Position
1269277..1270299
Genome browser
AA seq
340 aa
AA seq
DB search
MVFDVWKALKKGDVRSVYCLYGKETYLLQETVSRIRQAVVDEETKDFNLSVFDLEEDLLD
QAVTDAETFPFMGEKRLVIVKNPSFLTGEKKKEKIEHNTAALETYLKEPAPYTVFVIVAP
YEKLDERKKLTKALKQKALMIEAKELNAKETTDFTINLAKSENKMIDTEAAEHLVLLANG
HLSSIYQEIQKLSAYTGDRHEITLEDVRELVARSLEQNIFELINKIVNRKRTESLQIFYD
LLKQNEEPIKIMALIANQFRLIMQTKYFAGQGYGQKQIASNLKVHPFRVKLAMDQARLFS
EEELRRIIERLAVMDYEMKTGKKDKQLLLELFLLELLRTE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggtatttgatgtttggaaagccctgaaaaaaggggatgtccgctccgtttattgttta
tacggaaaagaaacgtatctgctccaagaaactgtcagccggatcagacaagctgtcgtt
gatgaggagacaaaagattttaacctgtctgtttttgatcttgaagaagatctgcttgac
caggccgtaaccgatgcggaaacgtttccgtttatgggagagaagcggctggtcatcgta
aaaaatccgtcttttttaacaggggaaaaaaagaaagaaaaaatagagcataatacagcc
gctctggagacttatctgaaggagcctgcgccttacacggtctttgtgattgtggctccg
tatgagaaactggacgaacggaaaaagctgacgaaagcgctgaagcaaaaagcccttatg
attgaagctaaggagctgaatgcaaaggagacgactgattttacgattaatctggcgaaa
tccgaaaataaaatgatcgatacagaagctgccgagcatttggttctgcttgcaaacggc
catctgtcttccatatatcaggaaatacaaaaactctccgcctacaccggtgacagacat
gagatcacacttgaagatgtccgggagctcgtcgcaagaagtttggagcagaatattttt
gagctgatcaacaaaatcgtgaaccgaaaacggacggaaagtcttcaaatattttatgat
cttttaaaacaaaacgaagaaccgatcaaaattatggcgctgatcgccaaccaattccgt
ctgattatgcagacgaagtattttgcaggacaaggatacggccaaaagcaaatcgcttcc
aacttaaaggtgcaccccttccgggtaaagctggcgatggatcaggcgaggcttttttct
gaagaagagctgcggcgtattatagaaagactcgcagtgatggattatgaaatgaaaacg
gggaaaaaggacaagcagctcttgctggagctctttctccttgagcttctccggactgaa
tga
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