Bacillus velezensis NAU-B3: BAPNAU_1238
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Entry
BAPNAU_1238 CDS
T02859
Symbol
yqfR
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bamb
Bacillus velezensis NAU-B3
Brite
KEGG Orthology (KO) [BR:
bamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bamb03019
]
BAPNAU_1238 (yqfR)
03009 Ribosome biogenesis [BR:
bamb03009
]
BAPNAU_1238 (yqfR)
Enzymes [BR:
bamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BAPNAU_1238 (yqfR)
Messenger RNA biogenesis [BR:
bamb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BAPNAU_1238 (yqfR)
Ribosome biogenesis [BR:
bamb03009
]
Prokaryotic type
rRNA helicases
BAPNAU_1238 (yqfR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CDH95019
LinkDB
All DBs
Position
1310790..1312106
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AA seq
438 aa
AA seq
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MKETKFDGYNLKPFIIDAVHRLGFYEPTDIQKRLIPAVLKNESVIGQSQTGTGKTHAYLL
PILNRIDPGSDTVQAVITAPTRELANQIHQEALKITQGAEDEPIRTKCFIGGTDKQKSID
KLKTQPHLVVGTPGRIADLIKAQALNVYKAQSLVIDEADLMLDMGFLEDVDFIGSRMPEE
LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKRITAEKIEHVLVPSKQRDKDKLLFDMM
SHLNPYLGIVFANTKNTADHIAKYLTEKGMRIGLLHGGLTPRERKKVMKQINDLEFTYVI
ATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQALTIYELSDEDALVRL
EKMGIVFDYAELVNGEWKKGDDRHRRKKRKKSENEADQMAKRLVKKPKKVKPGYKKKMGY
EMEKIKRKQRRNKSNKGK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaactaaatttgatggatacaacttaaaaccgtttattatagatgcagttcac
cgccttggtttttatgaaccgacagatattcaaaagcgtctgatacctgccgtactgaaa
aacgaaagcgtgatcgggcagtcccagacggggacggggaaaacccacgcctatttattg
ccaattttgaatcggattgatccgggttctgatacggtacaggctgttatcacggcgccg
acgagagagcttgccaatcagattcatcaggaagcgctcaaaatcacacagggtgcggaa
gatgagccgatccggacaaaatgcttcatcggcgggacggacaagcaaaaatcaattgat
aagctgaaaacacagcctcatctcgtcgtcggaacgccgggccggatcgcggatctgatt
aaggcgcaggcattgaacgtctataaagcgcagtctctcgtcattgacgaagctgatctg
atgcttgacatgggctttttagaagacgttgatttcatcggatcgcgtatgccggaagaa
cttcagatgctagtgttctcagctacgattccggaaaagctgaagccgtttttgaaaaag
tatatggaaaatccgaagtacgcgcatgttgagccgaaaagaatcacagccgaaaagatt
gaacatgttttggttccttctaaacagcgtgataaagacaaactgctttttgatatgatg
tctcatctgaacccttatctgggcattgtgtttgcaaatacgaaaaacacggctgaccat
attgcgaaatatctgactgaaaagggcatgaggatcggtcttctgcacgggggattaacg
ccgcgtgagcgtaagaaggtaatgaagcagattaatgatctggaattcacttatgtcatt
gcgacagaccttgcggcaagaggaattgacattaaaggcgtaagccacgtcatcaactat
gagcttccggacgatctggatttttatgttcaccgcgtcggtagaactgcacgcgccggt
tcatcaggtcaagcactgactatttatgagctttctgacgaagatgcgctcgtaagactc
gaaaagatgggtattgtgtttgactatgcggagcttgtaaacggcgaatggaagaaaggc
gatgaccgccaccgccgcaaaaaacgcaaaaaatcggagaatgaggccgaccaaatggcg
aagcgcctcgtgaaaaaaccgaaaaaagtgaagccgggctataaaaagaaaatgggctac
gaaatggaaaagataaaaagaaagcagagaagaaacaaatctaacaaaggaaagtag
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