Bacillus velezensis NAU-B3: BAPNAU_1289
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Entry
BAPNAU_1289 CDS
T02859
Symbol
sinR1
Name
(GenBank) HTH-type transcriptional regulator slrR
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
bamb
Bacillus velezensis NAU-B3
Brite
KEGG Orthology (KO) [BR:
bamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bamb03000
]
BAPNAU_1289 (sinR1)
Transcription factors [BR:
bamb03000
]
Prokaryotic type
Helix-turn-helix
XRE family
BAPNAU_1289 (sinR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
SinI
HTH_19
HTH_31
HTH_26
HTH_25
HTH_37
KorB
Sigma70_r4
HTH_10
GH-E
CdhC
Phage_CI_repr
DUF6364
Motif
Other DBs
NCBI-ProteinID:
CDH95070
LinkDB
All DBs
Position
complement(1348250..1348591)
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AA seq
113 aa
AA seq
DB search
MTLIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSV
HTLLDEKHETEYDGQLDSEWEKLVRDAMTSGVSKKQFREFLDYQKWRKAQKEE
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgacattgattggccagcgtattaaacaataccgaaaagaaaaaggctactcactatca
gaactagctgaaaaagctggggtagcgaagtcttatttaagctcaatagaacgaaattta
cagacgaacccctccattcaatttctcgaaaaagtctccgctgttctggacgtctcggtt
catactttacttgatgaaaaacatgaaaccgaatacgatggtcaattagatagtgaatgg
gagaaattagttcgcgatgcaatgacatccggggtatcaaaaaaacaatttcgtgaattt
ttagattatcaaaaatggagaaaagcgcaaaaagaggagtag
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