Bacillus velezensis NAU-B3: BAPNAU_1469
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Entry
BAPNAU_1469 CDS
T02859
Symbol
recQ1
Name
(GenBank) RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bamb
Bacillus velezensis NAU-B3
Pathway
bamb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAPNAU_1469 (recQ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bamb03019
]
BAPNAU_1469 (recQ1)
03400 DNA repair and recombination proteins [BR:
bamb03400
]
BAPNAU_1469 (recQ1)
Enzymes [BR:
bamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAPNAU_1469 (recQ1)
Messenger RNA biogenesis [BR:
bamb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BAPNAU_1469 (recQ1)
DNA repair and recombination proteins [BR:
bamb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BAPNAU_1469 (recQ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
PreAtp-grasp
Motif
Other DBs
NCBI-ProteinID:
CDH95250
LinkDB
All DBs
Position
1560853..1562343
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AA seq
496 aa
AA seq
DB search
MTELHKALSRYFGLHSFKKGQEEIMTSVLQKKDTIAMLPTGGGKSLCYQLPGYMMDGLVL
IISPLLSLMEDQVQQLKAKGEKRVAALNSMLNSAERHFILSNISRYKFLYMSPEALSSPY
VLNRLKNVPVSLFVIDEAHCISEWGHDFRPDYSKLGPFRQALGKPPVLALTATATKETLR
DVTDVLGLEHAVRHLYSVNRPNILLAAEHLADNAEKISRLTELAEKLEGPGIIYCPTRKW
AEELAAELNEKTGKRTDYYHGGMDTGDRILIQQQFIHNQLDCICCTNAFGMGVDKSDIRF
VIHFYPPQTAEAFMQEIGRAGRDGSPSVSILLRAPGDTELQQQIIQTESLSDYDLEAILA
VIRDAGTGDERKLRDVLINKGVQETQARTAVHLYLQGKTTKEQLQEELTYRVEKKLRKMN
RFSALLERKECIREALLSYFDEPYEPDGQTGQCCSSCGLDLAPYEQKGERKNMERFEDWK
LELGRIFGSESAGEFS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactgagctgcataaagctttatccaggtattttggtttgcattcctttaaaaaaggg
caggaagagattatgactagcgtgctccaaaaaaaagatacgatcgccatgcttccgacc
ggcgggggaaaatcattatgctatcagctcccgggttacatgatggacgggctggtgctg
attatttcaccgcttctttcattaatggaagatcaggtgcagcagctgaaagcgaaaggg
gaaaagcgggttgcggcattaaacagcatgctgaattccgcagagcggcattttatcctc
agcaacatcagccggtataaatttctctatatgtctcctgaagccctttcttcaccttat
gtgctgaaccgtttgaaaaatgtcccggtcagtttatttgttattgatgaggctcattgc
atatcagaatggggacatgatttcaggcctgattattcgaagctcggacctttcaggcag
gcactcggaaagccgcctgtattggcgctgaccgcaacagcgacaaaagaaacgctcaga
gacgtgacggatgtgctcggccttgagcatgcggtgcgtcatctttattcagtcaaccgg
ccgaatattctcctggcggcagaacatttggcggataatgccgagaaaataagcaggctc
acggagcttgccgaaaagcttgaaggcccgggtatcatatattgtccgaccagaaaatgg
gcggaagagcttgcggctgagctgaatgaaaaaacgggaaagcggacggattattatcac
ggcggaatggatacaggggacagaatcttgatccagcagcaatttatccataaccagctt
gattgcatctgctgcaccaatgcgttcggcatgggtgtggataagtcagatatccgcttt
gtcattcacttttatcctccccaaacggccgaggcctttatgcaggaaatcggcagagcg
ggacgcgacggcagcccgagtgtcagtattttgctgagggcgcccggcgataccgagctt
cagcagcagattattcagacagaaagcctgtctgattatgacctggaagccattctggcc
gtcatacgggatgccggtacgggtgatgagcgaaagcttcgggacgttctgatcaataag
ggcgtccaggaaacacaggcgcgaacggccgtccatctgtatctgcaaggaaaaaccaca
aaagagcagctgcaggaagaactgacataccgcgtggaaaaaaagctgcgtaaaatgaat
cgtttttcggcgttattagagcggaaagaatgtataagagaagcgctgctgtcttatttt
gatgaaccgtatgagcctgatggtcaaaccggacaatgctgcagcagctgcggacttgat
ctggctccgtacgagcaaaaaggagaacgtaaaaacatggaacggtttgaagattggaag
ctggaattaggccggattttcggttcagagtctgcgggtgagttcagctga
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