Bacillus velezensis NAU-B3: BAPNAU_1660
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Entry
BAPNAU_1660 CDS
T02859
Symbol
yorL
Name
(GenBank) DNA polymerase, phage SPbeta
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bamb
Bacillus velezensis NAU-B3
Pathway
bamb03030
DNA replication
bamb03430
Mismatch repair
bamb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAPNAU_1660 (yorL)
03430 Mismatch repair
BAPNAU_1660 (yorL)
03440 Homologous recombination
BAPNAU_1660 (yorL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bamb03032
]
BAPNAU_1660 (yorL)
03400 DNA repair and recombination proteins [BR:
bamb03400
]
BAPNAU_1660 (yorL)
Enzymes [BR:
bamb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BAPNAU_1660 (yorL)
DNA replication proteins [BR:
bamb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BAPNAU_1660 (yorL)
DNA repair and recombination proteins [BR:
bamb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BAPNAU_1660 (yorL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
Motif
Other DBs
NCBI-ProteinID:
CDH95441
LinkDB
All DBs
Position
1751228..1755157
Genome browser
AA seq
1309 aa
AA seq
DB search
MIGCHCHTDKSNIRLLDSTNSVGELLKTAVQMNYKGLAITDHEVLSAHLEAIKTVREMKK
KGDMPADFKLILGNEAYLVDSLEEVRDNYKSGQTKFPHFLMLAIDPKGHEQLRILSSQAW
ENSFYTGTMERVPTVKKDVEELLSKDPGHIIATTACLGSEVNINLLRIKECEESGDIQSI
KQHKLKIHEFITWCVKVFGKDKFFIELQPALSEEQIYCNKKLVDIANGYGLKVIVTTDAH
FLRPEDRAIHQAFLNAKDGEREVDSFYEACFVQNVDEIHERMDYMDKEIIKEAIENTLLI
GEMIEDYTIEHEPIIPKMALPEFELSHLFKPAYEKYKYIKLMAESDEEQDRYLLKLIEDG
FKAKLMKKDMSKKELHSILKRIDLELGELWEISEKLKQAMSSYYVTVREIINTIWDDECG
GDSLVGAARGSAAGFLVNYLLDITQINPMQYNLPHWRHIHKSRPDLPDIDIDTEGSKRPR
ILKALRDKFGEKRVLQICTFGTEKSKSALQTACRGLGIDNDVSQYLSGMIPFERGANWTL
SDCFFGNEKLGRKPIKEFIREVEGYPNLKETCLKIEGLTNKRSSHAAGVLIFNDEYTKSN
AMMRTPKGAYITQFNMGDSEAMGSVKYDLLTIEGLDKIRVALDQLIEDNQIESQGTLKRT
YTKYLHPDTLEYNSKRIWEMAGEGEIMDLFQFDTEVGNQSVVKVKPKNLLETAVTNSLMR
LMSEGEEQPVDTYVRFKKDIDHWYQEMRNYNLSSEEMDVLKKHLYKPEEGLYGIADTQES
VMMLSMDKEIAGFTIEESNKLRKGIAKKIKKMIDAIKTMFFEKGRSLGTSENLLKYVWEV
QFKRQFGYSFSSLHTLAYSIIALQELNLNYKYNPLYWSTACLTVNSGGIESEEDQATKKS
AATNYGKVAAAIGNIRKRGIKVDLPDINSANFGFKADTESNSIIFGLKGMNGIGDDVVHQ
IIVNRPYSDFDDFIERMFKSSILKKGQMIQLIKGGCFDSFGDRQKIMKSFISLISEPKTK
LTLSNLKMLIENNIVPQEYALEIRFFRFKEYISKKVYKTMKSPKDRLFLLDDMSSNFYDQ
HFSESGIVDVINGQLVISERLFKKEYDSKMSKIKDWISTEEALSGLNNCLLKKEWSKYAD
GSLGKWEMDSLSYYYNDHELSGVNFAKYDIADFYELPEEPVKGKPYQWRGKTLYEYETTR
IIGTVLDRDKNKHTITLLTPTGVVTVKQWAGSFGHYNKQISRPVAGGKKEVVEKSWYTRG
TLLMFTGFRRGNNFIPKVYKNSIYSHTVCRIDHVDSEGNISLTTKRAEV
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
ttgattggatgtcactgccacactgataaaagtaacataagactactcgattcaacaaac
tcagttggagaattgcttaagacagctgttcagatgaattataaaggattggctattact
gaccatgaggttctttcagcgcatttggaagcgattaagactgtcagagaaatgaagaag
aagggagatatgcctgcagattttaaactcatattggggaatgaagcatatttagtcgat
tcactggaagaagtccgcgataactataagtcaggacagacaaagtttccgcactttcta
atgttggcaattgaccctaaaggacacgagcagctaagaatactatcttcacaagcctgg
gaaaattcattttacacaggaacaatggaaagagtgccaacagttaaaaaggatgtagaa
gaactgcttagcaaagatccaggtcatattatcgctacaacagcttgtcttggctctgag
gtgaatatcaatttactcagaatcaaagaatgcgaagaaagcggagacattcagtcaatc
aagcagcacaaattaaaaattcatgagtttataacatggtgtgtaaaagtctttgggaaa
gataagttctttattgagcttcagccagctttaagtgaagaacagatttattgtaataag
aaacttgttgatatagctaacggctatggattgaaagtgattgtcacaaccgatgcacac
tttcttagaccagaagacagggcaattcatcaagcctttttaaacgccaaggatggagag
agagaagtcgactctttttatgaggcatgttttgttcagaatgttgatgaaattcatgag
agaatggactacatggacaaagagataatcaaagaggccattgaaaacacattgctaatt
ggagagatgattgaagactatactattgagcacgaaccaattattccaaaaatggcttta
cctgagtttgaattatcccatttgttcaagccggcttatgagaaatataaatatataaaa
ttaatggctgaatctgatgaagaacaggacaggtatttgttaaagctaattgaagatggt
tttaaggcaaagctaatgaaaaaggatatgtctaaaaaagagttgcactcaattttaaaa
cggattgatctagaattgggtgagctatgggaaattagtgagaagctaaaacaggccatg
tcatcttattatgttaccgtccgggaaatcatcaatacaatttgggatgatgaatgtgga
ggagacagcttagttggagcagcaagggggagcgcagcaggttttttagtaaattacttg
ttagacattacgcaaattaacccaatgcagtacaaccttcctcattggcgtcacatacat
aaatcgagaccagatttgccggatatcgatattgatactgaaggatctaagcgtccaaga
atcttaaaagcattaagggacaagtttggagaaaaaagagtactgcagatttgcactttt
ggaactgagaaatctaaatccgcacttcaaactgcttgcagaggcttaggaattgataat
gatgtctctcaatatttaagtggaatgattccatttgaaaggggagcaaactggactctc
tccgattgcttctttggcaatgaaaaattaggtagaaagcctattaaggaatttattaga
gaggtcgagggatatcccaatctgaaagaaacctgtctgaaaattgaaggtttaactaac
aaacgatcttctcatgcagccggcgtcctaatattcaatgatgaatacaccaaatcaaac
gcaatgatgagaacaccaaaaggagcatatatcacacagttcaatatgggcgacagtgaa
gcaatgggttcagttaagtatgatctattgactattgagggattagataaaattcgagta
gccttagaccagcttatcgaagacaatcaaatagagtcacaaggaactttaaaaagaact
tatactaagtatttacatccagatactttggagtataactctaagagaatatgggaaatg
gcgggcgaaggagaaataatggatttgtttcagtttgatacagaagtgggcaaccaatcc
gttgttaaagttaagccgaaaaacttattggaaacagccgtaacaaattctttaatgaga
ctgatgtcagaaggggaagaacagcctgtagatacatatgtaagatttaaaaaagacatc
gaccactggtatcaagaaatgagaaattacaatttaagttcagaagaaatggatgtactt
aaaaaacatctatataaaccagaagaaggtctatacgggatcgcagatacacaggaatca
gttatgatgctatccatggacaaagaaattgctgggtttaccattgaagaatctaataag
ctaagaaaagggatagccaaaaaaatcaaaaaaatgattgatgcaataaagacaatgttt
tttgagaaagggcgaagcttgggaacatctgaaaaccttttaaaatatgtctgggaagta
caatttaaaagacaattcggatactcgttcagcagcctgcatactcttgcatattctatt
attgctcttcaagaattgaaccttaactataagtacaacccattgtattggagcacagct
tgtttaacggtcaacagtggtggaattgagagcgaagaagatcaggccaccaaaaaatca
gccgccacaaactatgggaaagtggctgcagctatagggaatatcagaaaaagaggaatt
aaagttgatttacctgatatcaatagcgcaaattttggttttaaagcagatacggaaagt
aactctattatatttggattaaaaggaatgaatggaattggtgacgatgttgttcatcaa
ataattgtaaatagaccatatagtgactttgacgacttcatcgaaagaatgttcaaaagt
agcatccttaaaaaaggacagatgatccaactaataaaaggtggttgttttgattctttt
ggtgatagacaaaaaataatgaaatcctttattagtttgatatctgagcctaaaaccaaa
ctgactttatcgaatttaaaaatgctaatcgaaaacaatattgttccccaggaatatgct
ttagaaattagattcttccgtttcaaagaatacatcagcaaaaaggtttacaagacaatg
aaatctccaaaagacaggcttttcttattagatgatatgtcttccaacttttacgatcag
catttcagtgaaagcggaatcgttgatgtgattaatggacaacttgttatatcagaaaga
ttgtttaaaaaagaatatgacagtaaaatgtccaaaatcaaagactggatatcgactgaa
gaagccttaagtggacttaacaattgcttacttaagaaagagtggtctaagtatgccgat
ggatctcttggtaaatgggagatggattcattgagttattactataacgatcatgaactt
tctggtgttaactttgctaagtatgatattgctgatttttatgagctgccagaagagcca
gtcaaagggaaaccatatcaatggcgaggaaaaactctgtatgaatatgaaacgactcga
attataggaaccgtattagacagagataaaaacaagcacacaatcacactccttacacct
acaggggtggttacagttaaacagtgggctggcagctttgggcattataataaacagatt
tctcgacctgtcgctggcggcaaaaaagaggttgttgagaagtcttggtataccagagga
actttgctcatgttcactggattcagaagaggcaataactttattcctaaagtatataag
aacagcatctatagccacacggtctgtagaattgatcatgttgatagtgaaggcaatatt
agcttaacaaccaaaagagctgaggtatag
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integrated database retrieval system
