KEGG   Bacillus velezensis NAU-B3: BAPNAU_2328
Entry
BAPNAU_2328       CDS       T02859                                 
Symbol
rnjJ
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bamb  Bacillus velezensis NAU-B3
Pathway
bamb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bamb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BAPNAU_2328 (rnjJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bamb03019]
    BAPNAU_2328 (rnjJ)
Messenger RNA biogenesis [BR:bamb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BAPNAU_2328 (rnjJ)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 DUF5548 DUF4453
Other DBs
NCBI-ProteinID: CDH96108
LinkDB
Position
2543804..2545471
AA seq 555 aa
MKFVKNDQTAVFALGGLGEIGKNTYGVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYL
VKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLN
IIGEDDIVKFRKTSVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSEVPDFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQQ
VIEAAVLNGRKVAVFGRSMESAIEIGQNLGYITCPKNTFIEHNEINRMPANKVTILCTGS
QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGSL
NDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGIPEENCFIMDNGE
VLALKGEEAAVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMDDFKV
SAGPDLISRGFVYMRESGDLINDAQQLISNHLEKVMDRKTTQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaatttgtgaaaaatgaccagactgccgttttcgccctcggcggattgggcgagatc
gggaaaaatacgtacggggtgcagtttcaggatgaaattgtactgattgatgcgggaatc
aagttcccggaagatgaacttctcggcattgattacgtaatccccgattacacgtattta
gtaaaaaatgaagataaaattaaaggtctgtttatcacccacggtcacgaagaccatatc
ggcggtattccgtacctgctcagacaagtaaatattcccgtttacggcggtaaactcgcg
atcggcttacttcggaataaacttgaagagcacgggctgttaagacagaccaaattaaac
atcatcggtgaagacgacatcgtgaagttccgcaagacgtctgtatccttcttcagaacg
acacacagcattccggattcatacggaatcgtcgtcaaaacaccgccgggcaatatcgta
cataccggggactttaagttcgatttcacaccggtaggcgaaccggcaaacttgacaaag
atggctgaaatcgggaaagaaggcgttctgtgcctgctttctgacagtacaaacagtgag
gttcctgatttcaccatgtcagaacgccgcgtaggcgaaagcattcacgatattttccga
aaagtggacggcagaattatatttgcgacattcgcttcaaatatacaccgtcttcagcag
gtgattgaagcagccgttttaaacggcagaaaagttgccgtattcggacgcagtatggaa
tcggctattgaaatcggacaaaatctcggttacattacctgtcctaaaaatacgtttatt
gagcataacgaaatcaatcgtatgcctgccaataaggtaacgattttatgtacgggaagc
caaggtgaaccgatggcggcgttatcacgcatcgctaacgggacgcaccggcagatttcc
attaatcccggagatacggtcgtcttttcttcctctccgattcccggaaacacaatcagc
gtaagccgcaccatcaaccagctgtaccgtgcgggcgcagaagtcattcacggttcattg
aatgacattcatacatccggacacggcggacaggaagagcagaaattaatgctccgcctg
atcaaaccgaagttctttatgccgattcacggtgagtacagaatgcagaaaatgcacgtc
aaactcgcgactgattgcggcatacctgaagaaaactgctttatcatggataatggcgaa
gtgctggccctcaaaggcgaagaagccgctgtggcaggcaaaattccgtccggctccgtt
tacattgacggaagcggaatcggtgatatcggcaatatcgtgctccgcgaccgccgcatt
ctttcagaagaaggccttgttatcgttgttgtcagcatcaatatggacgactttaaggtt
tcggcgggacctgatttaatctcaagaggttttgtttacatgagagaatccggtgatttg
atcaatgacgcgcagcagctcatttcgaaccatctggagaaagtaatggatcggaaaaca
acgcagtggtccgaaattaaaaacgaaattaccgatacactagctccgttcctatacgaa
aaaacaaaacgccgcccgatgatccttccgatcattatggaggtctaa

DBGET integrated database retrieval system