Bacillus velezensis NAU-B3: BAPNAU_2532
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Entry
BAPNAU_2532 CDS
T02859
Symbol
xpf1
Name
(GenBank) positive control sigma-like factor
KO
K24072
positive control factor
Organism
bamb
Bacillus velezensis NAU-B3
Brite
KEGG Orthology (KO) [BR:
bamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bamb03021
]
BAPNAU_2532 (xpf1)
Transcription machinery [BR:
bamb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAPNAU_2532 (xpf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_38
HTH_23
GerE
HTH_36
PhyR_sigma-like
UPF0122
HTH_29
Fe_dep_repress
HTH_10
Motif
Other DBs
NCBI-ProteinID:
CDH96312
LinkDB
All DBs
Position
complement(2728748..2729260)
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AA seq
170 aa
AA seq
DB search
MEDLLFEYKRTLKETKKWYKQLEEADETVLTSEELKDKKIIRTIITDVEYVIEWLEKGRQ
PGIRRAIDRRDAYQRMLIKDPRIIETYSQALMFEPSANVTEEDRIRLRDALAVLTDREKE
MLLLHKAECFSYERIAALLNVKKSTVQTTVKRALLKIQKQQEQRNQSPAS
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggaagacttactatttgaatataaacgcacgctgaaagagacgaaaaagtggtacaag
cagctggaggaagccgatgaaacggtgcttacttcagaagaactgaaagataaaaaaatc
atcagaacaatcattacagatgtggaatatgtcatcgaatggcttgaaaaaggccggcag
cccggcataagaagagcgatagaccgcagagacgcttatcagagaatgctgattaaagat
ccgagaattatagaaacctattcacaggcgctgatgtttgaaccttccgcaaatgtgact
gaagaagacagaatcagactgcgggacgcattagccgttttaacggatagagaaaaagaa
atgctgctgctccacaaagcggaatgcttttcatatgaacggatcgccgccttgctgaat
gtaaagaaatcaaccgtacagacgacggtcaaacgggcgcttctaaaaattcaaaaacag
caagaacaaagaaatcaatcgcctgcttcataa
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