Bacillus amyloliquefaciens CC178: U471_12650
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Entry
U471_12650 CDS
T02893
Name
(GenBank) ECF subfamily RNA polymerase sigma-70 factor
KO
K24072
positive control factor
Organism
bamc
Bacillus amyloliquefaciens CC178
Brite
KEGG Orthology (KO) [BR:
bamc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bamc03021
]
U471_12650
Transcription machinery [BR:
bamc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U471_12650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_38
HTH_23
GerE
HTH_36
PhyR_sigma-like
UPF0122
HTH_29
Fe_dep_repress
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AGZ55971
LinkDB
All DBs
Position
1218744..1219256
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AA seq
170 aa
AA seq
DB search
MEDLLFEYKRTLKETKKWYKQLEEADETVLTSEELKDKKIIRTIITDVEYVIEWLEKGRQ
PGIRRAIDRRDAYQRMLIKDPRIIETYSQALMFEPSANVTEEDRIRLRDALAVLTDREKE
MLLLHKAECFSYERIAALLNVKKSTVQTTVKRALLKIQKQQEQRNQSPAS
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggaagacttactatttgaatataaacgcacgctgaaagagacgaaaaagtggtacaag
cagctggaggaagccgatgaaacggtgcttacttcagaagaactgaaagataaaaaaatc
atcagaacgatcattacagatgtggaatatgtcatcgaatggcttgaaaaaggccggcag
cccggcataagaagagcgatagaccgcagagacgcttatcagagaatgctgattaaagat
ccgagaatcatagaaacctattcgcaggcgctgatgtttgaaccttccgcaaatgtgact
gaagaagacagaatcagactgcgggacgcattagccgttttaacggatagagaaaaagaa
atgctgctgctccacaaagcggaatgcttttcatatgaacggattgccgccttgctgaat
gtaaagaaatcaaccgtacagacgacggtcaaacgggcgcttctaaaaatacaaaaacag
caggaacaaagaaatcaatcgcctgcttcataa
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