Bacillus amyloliquefaciens CC178: U471_13430
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Entry
U471_13430 CDS
T02893
Name
(GenBank) RNA polymerase sigma factor
KO
K03093
RNA polymerase sigma-I factor
Organism
bamc
Bacillus amyloliquefaciens CC178
Brite
KEGG Orthology (KO) [BR:
bamc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bamc03021
]
U471_13430
Transcription machinery [BR:
bamc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U471_13430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
CAMSAP_CC1
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AGZ56049
LinkDB
All DBs
Position
1279692..1280447
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AA seq
251 aa
AA seq
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MKPVLSLLFKLGKKKQTLETSVEKIQKGDKDLQNDLIQQYKPFIAKTVSSVCKRYIDEKD
DEFSIGLIAFNEAIEKYSAEKGNSLLAFAELIIKRKVIDYIRKEARTAQHINMDVQEGDD
QESSQSLIEAELSIDEYRKQIEQEQRREEILFFQKQLKEYGLSFKELLEQSPKHTDARQN
AIKVAYTLVENEELASILHQKKQLPVKQLEQLVSVSRKTIERNRKYIIAMSIIITGDYIY
LKDYLKGVLHS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccagtgcttagccttttgtttaaattgggaaaaaagaagcaaacgcttgaaaca
tctgttgaaaaaatacaaaaaggcgacaaagatctgcagaacgatttaatacagcaatat
aagccttttatcgcgaagacggtttcatccgtttgtaaacgatatatagatgaaaaagac
gacgaattcagcatcgggctgatcgcgtttaacgaagccattgaaaaatattcggctgaa
aaaggtaattcgctgcttgcatttgcagagctgattataaaaagaaaagtgatagattat
atcagaaaagaagcaagaaccgctcagcatatcaatatggatgtgcaggaaggcgacgac
caggaatcttcgcagagccttatcgaagcggagctttccattgatgaataccgcaaacag
atagaacaggaacagcgccgggaagaaattcttttttttcagaagcagctgaaagaatac
ggcctgtcttttaaagagctgctggaacaatcgccgaaacatacagatgcgaggcagaat
gcgattaaggtagcctacacgcttgttgaaaatgaagagctggcgtccattttgcaccag
aaaaaacagcttcctgtcaagcagctggagcagctcgtgtcggtcagcagaaaaacgatc
gaacggaaccgaaaatatatcatcgccatgagtattattattaccggtgattatatttat
ttaaaagattatcttaaaggggtgttgcactcatga
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