Bacillus amyloliquefaciens CC178: U471_15390
Help
Entry
U471_15390 CDS
T02893
Name
(GenBank) spoVD
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
bamc
Bacillus amyloliquefaciens CC178
Pathway
bamc00550
Peptidoglycan biosynthesis
bamc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bamc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U471_15390
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bamc01011
]
U471_15390
Peptidoglycan biosynthesis and degradation proteins [BR:
bamc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
U471_15390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
AGZ56241
LinkDB
All DBs
Position
1495867..1497786
Genome browser
AA seq
639 aa
AA seq
DB search
MRVSNVTVRKRLLLVLLFGVIIFLIIDSRLGYVQFVMGEKLTSLAKDSWSRNLPFEPERG
EILDRNGVKLATNKSAPTVFVVPRQIQNPIKTGKLLASVLNMSEEKVYKHITKKTSIEKI
SPEGRKISNKKAKEIKALDLKGVYVAEDSIRHYPYGSFLSHVLGFAGIDNQGLLGLEAYY
DDDLKGVKGSVKFYTDAKGKKMPDEADDYTPPKDGLDMKLTIDAKVQTIIERELDNAAAK
YNPDGMIAVAMNPKNGEVLGMSSRPDFDPADYQSVDPSVYNRNLPVWSTYEPGSTFKIIT
LAAALQEQKVNLQRDHFYDKGFAEVDGARLRCWKKGGHGSQSYLEVVQNSCNPGFVQLGE
RLGKQKLFQYIKDFGFGKKTGIDLQGEGTGILFPLDRVGPVEQATTAFGQGVSVTPIQQV
AAVSAAINGGTLYTPFIAKEWVDPVTKKTVKKQSPIAKRQVISQETSKQIRYALESVVAQ
GTGRNAFVEGYRVGGKTGTAQKVKDGKYLENNHIVSFIGFAPADDPSLVVYVAVDNPKGT
IQFGGTVAAPIVGNMMRDSLPELGVKPRKNQIEKKYQWNDTKTIEVPNVVGMSVSDLESL
LVNLNIDSSGKGSKIVKQSPAAGTKVKEGSKIRVYLSEE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtttcaaatgtaacggttcgaaaacgtttattactggttttgctttttggcgta
atcatttttttgatcattgacagcagattaggctatgtccaatttgtgatgggagaaaag
ctgacttcactggctaaggattcctggagccggaatttgccgtttgagcctgagcgggga
gagatccttgaccgaaacggcgtgaagctggcaactaataaaagcgcgccgaccgtcttt
gtcgtaccgcgccagatccaaaatcccataaaaacgggcaaacttctcgcgtcagtttta
aatatgtcggaagagaaggtctacaaacacattactaagaaaacctccatagaaaaaatc
tcacccgaggggcggaaaatttccaataaaaaagcgaaagaaatcaaagcgctcgactta
aaaggggtgtatgtggctgaagacagcatccgccattatccgtacggaagctttttgtcc
catgttctcggttttgccggtattgataaccagggtcttctcggtttggaggcttattat
gatgatgacttaaaaggtgtaaagggatctgtgaaattttatacggatgccaaggggaag
aaaatgcctgatgaagcggatgattacacccctccgaaagacggacttgatatgaaactg
acgattgacgccaaggttcagacgattatagaaagagagctcgacaatgcagcggcgaaa
tataacccggacggaatgattgcggtcgcaatgaatccgaaaaacggggaagtgctcggc
atgtcaagccgtcctgattttgatccggctgactatcaatcggtggatccgtccgtttac
aaccggaacctgccggtatggagcacatatgaaccgggttcgacctttaagattattacg
cttgcggcggctcttcaagagcaaaaagtaaacttgcaaagagaccacttttatgacaaa
ggatttgccgaggtcgacggcgcccgcctccgatgctggaaaaagggcggccacggttcg
caatcttatcttgaagttgttcaaaattcctgcaaccccgggtttgtacagctcggggaa
cggctcggaaaacaaaagctgtttcaatatattaaggacttcggctttggaaagaaaaca
ggcattgatctgcaaggggaaggaacggggatcttattcccgcttgacagagtcggcccg
gtcgaacaggcgacaaccgctttcggacaaggggtttccgtcacgccgattcagcaggtg
gcagccgtttccgcagcaataaacggcggaacgctttatactccgtttatcgccaaagag
tgggttgatcccgttacgaaaaaaaccgttaagaaacaatcgccgattgcgaaaaggcaa
gttatttcccaggaaacgtcaaagcagatcagatatgctttagaaagcgtcgtcgctcag
ggaacggggcggaatgcctttgtggaaggatatcgcgtcggcggaaaaacaggtaccgca
caaaaggtcaaagacggcaaatatctcgaaaacaaccatatcgtctcttttatcggtttt
gcgccggccgatgacccgagccttgtcgtgtatgtcgcggttgataatccgaaaggcacg
attcaattcgggggaaccgtcgccgcgccgattgtcggaaatatgatgagagacagtctg
cctgagctcggcgtgaaaccgcgaaaaaatcaaatcgagaaaaaatatcaatggaacgac
acaaaaacaatagaggttccgaatgttgtagggatgtctgtctctgatcttgagtcgctg
cttgtcaatttgaatattgactcctcaggaaaaggaagcaaaattgtgaaacaatcacct
gcagccggaacgaaagtaaaagaaggctcaaagatccgtgtttacttgagtgaagaatga
DBGET
integrated database retrieval system
