Bacillus amyloliquefaciens CC178: U471_16160
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Entry
U471_16160 CDS
T02893
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bamc
Bacillus amyloliquefaciens CC178
Brite
KEGG Orthology (KO) [BR:
bamc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bamc03019
]
U471_16160
03009 Ribosome biogenesis [BR:
bamc03009
]
U471_16160
03036 Chromosome and associated proteins [BR:
bamc03036
]
U471_16160
Enzymes [BR:
bamc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
U471_16160
Messenger RNA biogenesis [BR:
bamc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
U471_16160
Ribosome biogenesis [BR:
bamc03009
]
Eukaryotic type
90S particles
RNase
U471_16160
Prokaryotic type
rRNA processing factors
U471_16160
Chromosome and associated proteins [BR:
bamc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
U471_16160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Phage_P2_GpU
Motif
Other DBs
NCBI-ProteinID:
AGZ56318
LinkDB
All DBs
Position
1576139..1576888
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AA seq
249 aa
AA seq
DB search
MSKHSHFKDKKKFYKKIEQFKEFQERISVHFQNEKLLYQAFTHSSYVNEHRKKPYEDNER
LEFLGDAVLELTISQFLFAKYPAMSEGDLTKLRAAIVCEPSLVSLAHELSFGDLVLLGKG
EEMTGGRKRPALLADVFEAFIGALYLDQGLDPVQQFLKVYVFPKINDGAFSHVMDFKSQL
QEFVQRDGKGSLEYKILNEKGPAHNREFEALVSLKGEALGIGNGRSKKEAEQHAAQEALA
KMQKHHTKQ
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacactcacattttaaagataaaaaaaagttctataaaaaaatagagcaattt
aaagagttccaagaacggatttcggttcattttcaaaacgagaaacttttgtatcaagca
tttacacattcatcttatgtgaatgagcatcggaaaaagccgtatgaagacaatgaaagg
cttgaatttttaggtgacgctgttttggaactgacgatctcccaattcttatttgccaaa
tatccggccatgagtgaaggagatttgacgaagctgagagccgctatcgtatgcgagccg
tcactcgtctcacttgcccatgaattgtcattcggcgatcttgttctcttgggaaaagga
gaagaaatgacgggcggcagaaagcgtcctgcgcttttagcggatgtgtttgaagcgttt
atcggcgcactgtatctggatcagggccttgacccggttcagcaattcctgaaagtgtac
gtgttccctaaaataaacgatggtgctttttctcatgtgatggatttcaaaagccagctt
caagaatttgtacagcgggacggaaaaggatcgcttgagtacaaaattctcaatgaaaaa
gggcctgcccacaaccgggaattcgaggcgcttgtctcccttaaaggtgaggcgctcggt
atcgggaacggacgttccaaaaaagaagccgagcagcatgcggcacaggaagctcttgca
aaaatgcaaaaacatcatacgaaacaataa
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