Bacillus amyloliquefaciens CC178: U471_22900
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Entry
U471_22900 CDS
T02893
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bamc
Bacillus amyloliquefaciens CC178
Brite
KEGG Orthology (KO) [BR:
bamc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bamc03016
]
U471_22900
Enzymes [BR:
bamc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
U471_22900
Transfer RNA biogenesis [BR:
bamc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
U471_22900
Prokaryotic type
U471_22900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
NAD_binding_10
DUF3256
Motif
Other DBs
NCBI-ProteinID:
AGZ56988
LinkDB
All DBs
Position
complement(2348609..2349535)
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AA seq
308 aa
AA seq
DB search
MELLFLGTGAGMPAKTRNVTSVALKLLEERRSVWLFDCGEATQHQILHTTIKPRKIEKIF
ITHLHGDHVYGLPGLLGSRSFQGGEEELTIYGPKGIKAFIETSLNVTATHLTYPLTVHEI
EEGTVFEDEQFIVTAASVIHGVEAFGYRVQEKDIPGALQAGRLKEMNIPPGPVYQKIKKG
ETVTLDDGRIINGRDFLEPPKKGRIVAFSGDTRASERVTELARNADVLVHEATFAKEDAK
LAHNYYHATTEQAAQTAKKAGAKQLILTHISARYQGESPIERLEHEAKAVFENSKIAFDF
MEVTVERS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtggaattattatttttagggacgggggccggcatgccggcaaagacgagaaacgtaacg
tccgtcgcgctgaagcttcttgaagaaaggcgttccgtatggctgtttgattgcggagaa
gccactcagcatcagatattacatacaacaatcaaaccgaggaaaattgagaagattttc
atcacccaccttcacggcgaccatgtttacggtcttccgggtctgttggggagccgttca
tttcagggcggtgaagaagagctgacgatttacgggccaaaaggcattaaagcctttatc
gaaacaagcctgaacgtgacggcgactcatctgacgtatcctcttaccgtacatgaaatc
gaagaggggacggtttttgaagatgagcaattcattgttaccgcagcatccgtcattcac
ggcgtggaagcgttcggctaccgggttcaggaaaaggatattcccggcgcattgcaggcc
ggcagattaaaagaaatgaatatcccgcccggacccgtctatcagaaaatcaaaaaaggc
gaaacggtcacacttgacgatggcagaatcattaacgggcgggattttttggaacccccg
aaaaaagggagaatcgtcgctttttccggggatacgagggcatcagagcgggtaacggag
ctggcgcgcaatgcggatgtgcttgttcatgaagcaacatttgcaaaggaagatgcaaag
ctcgcacataattattatcacgcgacgacagaacaggctgcgcaaacggcaaaaaaagca
ggcgccaaacagctgatcttaactcatatcagcgcaaggtatcagggtgaatcgccgata
gagcgtctcgaacatgaggcgaaagcggtatttgaaaacagtaagatcgcatttgacttc
atggaggtcactgtggagaggtcttaa
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