Bacillus amyloliquefaciens CC178: U471_24250
Help
Entry
U471_24250 CDS
T02893
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bamc
Bacillus amyloliquefaciens CC178
Pathway
bamc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bamc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U471_24250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamc03400
]
U471_24250
Enzymes [BR:
bamc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
U471_24250
DNA repair and recombination proteins [BR:
bamc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
U471_24250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
OST3_OST6
Motif
Other DBs
NCBI-ProteinID:
AGZ57123
LinkDB
All DBs
Position
complement(2459988..2460881)
Genome browser
AA seq
297 aa
AA seq
DB search
MLKIGSHVSMSGKHMLLAASKEAVSYGANTFMIYTGAPQNTRRKKIEDLNIEAGRAHMKE
NGIDEIVVHAPYIINIGNTTNPATFELGVDFLRSEIERTAAIGARQIVLHPGAHVGAGAE
TGIKKIIEGLNEVIVPGQNVQIALETMAGKGSECGRSFEELAEIIAGVTHNEHLSVCFDT
CHTHDAGYDVANDFDGVLNEFDKIVGIDRIKVLHVNDSKNIKGARKDRHENIGFGEIGFD
ALQYIVHHEQLADIPKILETPYVGEDKKNKKPPYRFEIEMLKEKQFDKELLEKISAQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaaaataggttcacacgtctcaatgagcggaaaacatatgctccttgccgcaagc
aaggaagctgtttcgtacggggcgaacacatttatgatctatacgggcgctccccaaaac
acgcgccgcaaaaaaattgaggacttgaatattgaagcgggccgcgcccatatgaaggaa
aacggcatcgatgagattgtcgtgcatgcgccgtacatcattaacattggaaatacgaca
aatccggcaacatttgagctgggcgttgattttctgcgttctgaaattgaaagaacggca
gcgatcggcgcgagacagatcgtgcttcatccaggggcgcatgtcggagccggggctgag
acgggcatcaaaaaaatcattgaaggtttaaacgaagtgattgttcccgggcaaaacgtg
cagattgcgctggagacaatggcgggcaaaggatcagaatgcggaagaagctttgaagag
ctggccgagatcattgcgggagtcacgcataatgaacatctatccgtctgctttgacact
tgccacacccatgacgccgggtatgatgtcgctaatgattttgacggtgttcttaacgag
tttgataaaatcgtcggcatcgatcggataaaagtccttcatgttaacgacagtaaaaat
attaaaggcgcccggaaagaccgccatgaaaatatcgggttcggagagatcggttttgac
gctctgcagtacatcgttcatcacgagcagcttgccgatattccgaaaatcctcgaaaca
ccgtatgtaggcgaagacaagaaaaataagaagccgccgtaccgttttgaaatcgaaatg
ctgaaagaaaagcagtttgataaggagcttcttgaaaaaatatcagctcaataa
DBGET
integrated database retrieval system
