Bacillus amyloliquefaciens CC178: U471_24260
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Entry
U471_24260 CDS
T02893
Name
(GenBank) cshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bamc
Bacillus amyloliquefaciens CC178
Brite
KEGG Orthology (KO) [BR:
bamc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bamc03019
]
U471_24260
03009 Ribosome biogenesis [BR:
bamc03009
]
U471_24260
Enzymes [BR:
bamc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
U471_24260
Messenger RNA biogenesis [BR:
bamc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
U471_24260
Ribosome biogenesis [BR:
bamc03009
]
Prokaryotic type
rRNA helicases
U471_24260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGZ57124
LinkDB
All DBs
Position
complement(2460893..2462236)
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AA seq
447 aa
AA seq
DB search
MCRFKELGKMKETKFDGYNLKPFIIDAVHRLGFYEPTDIQKRLIPAVLKNESVIGQSQTG
TGKTHAYLLPILNRIDPGSDTVQAVITAPTRELANQIHQEALKITQGAEDEPIRTKCFIG
GTDKQKSIDKLKTQPHLVVGTPGRIADLIKAQALNVYKAQSLVIDEADLMLDMGFLEDVD
YIGSRMPEELQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKRITAEKIEHVLVPSKQRD
KDKLLFEMMSHLNPYLGIVFANTKNTADHIAKYLTEKGMRVGLLHGGLTPRERKKVMKQI
NDLEFTYVIATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQALTIYEL
SDEDALARLEKMGIVFDYAELVNGEWKKGDDRHRRKNRKKTANEADQIAKRLVKKPKKVK
PGYKKKMSYEMEKIKKKQRRNQSNRGK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgctttaaggagctgggaaaaatgaaagaaactaaatttgatggatacaattta
aaaccgtttattatagatgcagttcaccgccttggtttttatgaaccgacagatattcaa
aagcgtctgatacctgccgtactgaaaaacgaaagcgtgatcgggcagtcccagacgggg
acggggaaaacccacgcctatttattgccaattttgaatcggattgatccgggttctgat
acggtacaggccgttatcacggcgccgacgagagagcttgccaatcagattcatcaggaa
gcgctcaaaattacacagggtgcggaagacgagccgatccggacaaaatgcttcatcggc
gggacggacaagcaaaaatcaattgataagctgaaaacacagcctcatctcgtcgtcgga
acgccgggccggatcgcggatctgattaaggcgcaggcattgaacgtctataaagcgcag
tctctcgtcattgacgaagctgatctgatgcttgatatgggctttttagaagacgttgat
tacatcgggtcgcgtatgccggaagaactgcagatgcttgtgttctcagctacgattccg
gaaaagctgaagccgtttttgaaaaagtatatggaaaatccgaagtacgcgcatgttgag
ccgaaaagaatcacagccgaaaagattgaacatgtgttggttccttctaaacagcgtgat
aaagacaaactgctttttgaaatgatgtctcatctgaacccttatctgggcattgtgttt
gcaaatacgaaaaacacggctgaccatattgcgaaatacctgactgaaaaaggaatgaga
gtcggtcttctgcacgggggattaacgccgcgtgagcgtaagaaggtaatgaagcagatt
aatgatctggaattcacttatgtcattgcgacagaccttgcggctagaggaattgacatt
aaaggcgtaagccacgtcatcaactacgagcttccggacgatttggatttttatgttcac
cgtgtcggaagaactgcacgcgccggttcatcaggccaagcactgaccatttatgagctt
tctgacgaagatgcgctcgcaagacttgaaaagatgggcattgtgtttgactatgcggag
cttgtaaacggggaatggaagaaaggcgatgaccgccaccgccgtaaaaatcgcaaaaag
acggcaaatgaggctgaccaaattgcgaaacgcctcgtaaaaaagccgaaaaaagtaaag
ccgggctataaaaagaaaatgagctacgaaatggaaaaaattaaaaagaagcagagaaga
aaccaatctaacagaggaaagtag
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