Bacillus amyloliquefaciens CC178: U471_25800
Help
Entry
U471_25800 CDS
T02893
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bamc
Bacillus amyloliquefaciens CC178
Pathway
bamc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U471_25800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamc03400
]
U471_25800
Enzymes [BR:
bamc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U471_25800
DNA repair and recombination proteins [BR:
bamc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U471_25800
RecFOR pathway proteins
U471_25800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
DUF815
nSTAND3
Rad17
NB-ARC
AAA_22
TsaE
AAA_3
RNA_helicase
NTPase_1
AAA_14
AAA_24
Resolvase
NPHP3_N
Sigma54_activ_2
AAA_17
AAA_25
MCM
AAA_18
AAA_28
TniB
Bac_DnaA
IstB_IS21
ABC_tran
NACHT
Motif
Other DBs
NCBI-ProteinID:
AGZ57278
LinkDB
All DBs
Position
complement(2602807..2603811)
Genome browser
AA seq
334 aa
AA seq
DB search
MDERLVSSEADSHESIIEQSLRPQNLAQYIGQKKVKENLRVFIDAAKMRQETLDHVLLYG
PPGLGKTTLASIVANEMGVEMRTTSGPAIERPGDLAAILTALEPGDVLFIDEIHRLNRSI
EEVLYPAMEDFCLDIVIGKGPSARSVRLDLPPFTLVGATTRVGLLTAPLRDRFGVLSRLE
YYTQEELTDIVSRTADVFEVDIEKAPALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRI
TEEIAHDALERLQVDALGLDHIDHKLLMGMIEKFSGGPVGLDTISATIGEEPHTIEDVYE
PYLLQIGFLQRTPRGRVVTPAVYEHFRLEAPARD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacggctcgtttcaagtgaagcagacagccatgaatcaataatcgagcaaagc
ctcaggccgcagaatctcgcccagtatatcggccaaaagaaggtgaaagaaaatctgcgc
gtgtttatcgatgcggcgaaaatgaggcaggaaacgctggaccacgttcttttatacggg
cctccgggtctcgggaaaacaacgcttgcgtctatcgtggccaatgagatgggtgtggag
atgcggacgacatcaggtcccgccatcgaaagaccgggagatttggcagccattttgacg
gcgctcgaaccaggggatgtgctgtttatagacgaaattcacaggctgaaccgctcaatt
gaggaagtgctgtacccggcgatggaggatttctgccttgatatcgtcattggaaaaggc
ccgtccgcccgctccgtccgtctcgaccttcccccttttacgcttgtaggagcaacgaca
agggtcggattattgaccgcaccgctcagagaccggttcggggtgctgtcgcgccttgaa
tactatacgcaggaagagctgacagatatcgtgtcaagaacggctgacgtttttgaagtg
gatatcgaaaaagcaccggctctggaaatcgccagacggtcaaggggaacgccgcgggtt
gcaaaccggcttctcagaagggtgagagattttgcccaggtgctcggcgacagccgcatc
acggaagaaatcgctcacgacgcgctcgaacgtcttcaagtcgatgcgctcggccttgac
catatcgaccataagctgctgatgggcatgatcgaaaaattcagcggcggtcccgtcggc
cttgatacgatttccgcgacaatcggcgaagaaccgcatacaatagaggatgtgtacgaa
ccgtatctgctgcagatcggatttcttcagaggacgccgaggggacgggtcgtgactccg
gctgtgtatgaacattttcgattggaggcgcccgcccgtgactga
DBGET
integrated database retrieval system
