Bacillus amyloliquefaciens CC178: U471_31770
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Entry
U471_31770 CDS
T02893
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bamc
Bacillus amyloliquefaciens CC178
Pathway
bamc03420
Nucleotide excision repair
bamc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bamc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U471_31770
03430 Mismatch repair
U471_31770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamc03400
]
U471_31770
Enzymes [BR:
bamc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U471_31770
DNA repair and recombination proteins [BR:
bamc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U471_31770
MMR (mismatch excision repair)
Other MMR factors
U471_31770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
Viral_helicase1
AAA_30
PhoH
SLFN-g3_helicase
AAA_16
DEAD
nSTAND3
RasGAP_C
NACHT
Motif
Other DBs
NCBI-ProteinID:
AGZ57875
LinkDB
All DBs
Position
complement(3174952..3177360)
Genome browser
AA seq
802 aa
AA seq
DB search
MPILLYINYMYPILFYSISYVFVNYFLEVPFMNQQDKEWKEEQSRIDEVLKELRKKERSL
ETSSGGLKQDIVGLRKTFWDDVTVNMDDAHEAAETFSSIKQQAEMLSERERTHRLQYRQL
QKIQKLKTSPYFGRVDFTEKGESSSERIYIGLTSLMDENNEQFLIYDWRAPISSLYYQYS
PGKARYEVPEETIEGDITLKRQFIIKNGTLKAMFNTDMTIGDEMLQEVLSGHSGQHMKNI
VSTIQKEQNEIIRDEKSKYLIVQGAAGSGKTSAALQRAAYLLYRGRGVLDARQIVLFSPN
ILFNSYVSAVLPELGEENMEQATFQEYIIRRLGRKFDCESPYEQLEYCLTEQNQDALSVR
LAAIAYKASSAFQAMIDRYACSLSGSGLMCKQISFRGDILISKERIEAYFYSLDQQLPIP
NRAELTAEWLLAEISALEKKERKKEWVLQESELLDKEDYAEVYQTLKKQAADDEPAFDDH
QREQRLLGAIIVGKAFKPIKQAVRRLGFLDIKRMYLRLFSDWGADEKPDHWESIGALTRN
AFAERSLPYEDAAPYLYLQDLLEGKRKNTQMKHVFIDEAQDYSPFQLTYIQSIFPAAKMT
VLGDVSQSIYAHTITGPSSLAGCFRNGAEKYVSLKRTYRSTRQIVEFTKALLADGDDIEP
FNRNGEKPRVLRTDTENARQEQLADTIRELRQKGWETVAVICKTAAEAKKVFQAVSAESG
VRLINKENQPFQKGVCVIPVYLAKGIEFDAVIAADASAAQYKSEHDRKLLYTACTRAMHH
LTVLSPGEHSPFIKEVPAGLFV
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
ttgcctattttattatatattaattatatgtatccaattttattttacagtatttcgtat
gtgtttgtcaactattttctggaggtgccgttcatgaatcagcaggataaggaatggaag
gaagagcagtcaagaatagatgaagtgctgaaggagctccgcaaaaaagagcggtctctg
gaaacatcatcgggcggattgaagcaggatattgtcgggctgagaaaaacgttttgggat
gatgtcaccgtgaatatggatgacgcccacgaagcggctgagacattttcaagcattaaa
cagcaggcggaaatgctttcagaacgtgaacggacgcatcggcttcaataccggcagctt
caaaaaatccaaaagctgaaaacctctccttacttcggccgtgtcgattttacggaaaaa
ggggagtcctcttccgagcggatttatatcgggctgacttctttgatggatgaaaacaac
gagcaatttctcatttatgattggcgcgcgcccatctcatctctttactatcaatattcc
ccgggaaaagcccgctatgaagttcccgaagaaacgatagaaggagacatcacactgaag
cggcagtttatcattaaaaacgggacgcttaaagcgatgtttaacacggatatgacgatt
ggtgacgaaatgctgcaagaggtgctgagcgggcattccggacagcatatgaaaaacatc
gtgtcaaccatccaaaaagaacagaacgaaatcatccgggatgaaaaaagcaaatatctc
atcgttcagggagccgccggaagcgggaaaacatccgcggcgcttcagcgggccgcttac
ttgctgtaccgcgggcgcggggtgcttgatgcccgtcagattgtattgttttccccgaac
attttgttcaacagttatgtttccgccgtattgccggaattgggagaagagaatatggag
caggccacctttcaggaatatatcatccgccggctcggacgaaagtttgattgtgaaagc
ccgtacgagcagcttgaatattgcctgactgaacaaaatcaggacgcactttccgtaagg
ctcgcagccattgcttacaaagcgtcatcagctttccaggccatgattgaccgctacgcc
tgctcgctttccggctcgggcctgatgtgtaaacagatcagcttccggggagacatcctg
atttcaaaagaacggattgaagcctatttttattcgcttgatcagcagctgccgattccg
aacagagcggagctgacagcggaatggcttctcgcggaaatcagcgctctcgaaaaaaag
gagcgtaagaaggaatgggtcttgcaggagagcgagctgcttgataaggaagactatgct
gaggtttatcaaacactcaagaagcaggcggcagatgatgaacctgcatttgacgaccat
cagcgcgaacagcggctgcttggcgccattattgtcggcaaagcctttaaaccgattaag
caggccgtcagacggctcggctttctcgatataaaacggatgtatctccggctgttttca
gactggggagctgatgaaaagcccgatcattgggagagcatcggcgctttgaccagaaac
gcatttgcagaacggtcacttccgtatgaagatgccgctccgtatctgtatttgcaggat
ctgttagaaggaaaaagaaaaaacacacaaatgaagcacgtcttcattgatgaagcgcag
gattattccccatttcagctcacgtatattcaaagcatcttcccagcggcaaagatgacg
gtgctcggtgatgtcagccagtcgatttatgcccacaccattacgggcccttcttccctc
gccggctgctttcgcaatggtgcagaaaagtatgtcagcctgaagcggacttacagatcg
acgcggcagattgttgaatttacgaaagcgctgctggctgacggcgatgacattgagcct
tttaaccggaacggggaaaaaccgcgtgttttgcggacggatacagaaaatgcgcggcag
gaacaattggcggatacaatccgggagctcagacaaaaaggctgggagacggtcgccgtc
atctgcaaaacggccgcggaagccaaaaaagtgtttcaggcggtcagcgccgagagcggt
gtccgcttgatcaataaagaaaaccagccttttcaaaaaggggtatgcgtcattcccgtt
tatttggcaaaaggcattgagtttgacgccgtcattgccgctgatgcctctgctgcccag
tacaaaagcgaacatgaccgtaagctgttatatacggcctgtacgcgggcgatgcatcat
ctgaccgtattgtctccgggagaacactctccttttattaaagaagtgcccgccggctta
ttcgtgtaa
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