Bacillus amyloliquefaciens LFB112: U722_00020
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Entry
U722_00020 CDS
T02965
Name
(GenBank) recombinase F
KO
K03629
DNA replication and repair protein RecF
Organism
bamf
Bacillus amyloliquefaciens LFB112
Pathway
bamf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U722_00020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamf03400
]
U722_00020
DNA repair and recombination proteins [BR:
bamf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
U722_00020
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_27
DUF2813
AAA_21
AAA_29
ABC_ATPase
ABC_tran
AAA_13
Motif
Other DBs
NCBI-ProteinID:
AHC40613
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Position
3438..4550
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AA seq
370 aa
AA seq
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MYIQNLELTSYRNYERAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKEL
IRWDEDYAKIEGRVMKRNGDIPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPED
LNLVKGSPQVRRRFLDMEIGQVSAVYLYDLSLYQKILSQRNHFLKQLQSRKQTDRTMLDV
LTDQLIEAAAKVVARRLQFTAQLEKWAQPIHSGISRGLEELTLKYHTALDVSDPKDLSKI
GNSYQESFSKLKEKEIERGVTLFGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEI
DLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHDTLHQAGM
FRVENGALVK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
ttgtatatccaaaatttagaattaacatcctaccgtaattatgagcgcgctgagcttcaa
ttcgaaaacaaggtgaatgtgatcatcggggaaaatgcccagggcaaaaccaatctgatg
gaagccatctatgtcctttcgatggcaaaatcacaccgcacctcaaatgacaaagaactt
atacggtgggacgaagactatgctaaaatagaaggaagagtgatgaagcgcaacggggac
atcccgatgcagcttgtcatctccaaaaaaggtaaaaagggcaaggtcaatcatatagag
cagcaaaaactcagtcagtatgtcggagcgctgaacaccattatgtttgcccctgaggat
ttaaatctcgtcaaaggaagccctcaggtgaggagaagatttctcgatatggagatcggg
caggtttctgccgtttatctgtatgatttatctctttatcaaaaaatcctttcacagcgg
aatcattttctgaaacagctgcaaagccggaaacagactgaccggaccatgcttgacgtt
ctcactgatcagctgattgaagcagccgcaaaagttgtcgccagacgtctgcagtttacg
gcgcagcttgaaaaatgggcgcagccgatccattccggcatttcccggggacttgaagaa
ctgacgcttaagtatcacacggcgcttgatgtatcagatcccaaagatttgtcgaaaata
ggtaacagctaccaggagtctttttcgaaattaaaagaaaaagaaatagaacgaggcgtc
acattattcggaccgcatcgggatgatgtccttttttatgtgaacggacgcgatgtgcag
acttacggttcgcagggacagcagcgtacgacggctttgtctctgaagctggctgaaata
gatttgattcatgaagaaatcggagaataccccattttacttttggatgatgtactaagc
gagctggatgattaccgacagtcccatttgcttcatacgatccaaggccgtgtgcagaca
tttgtcaccacgacgagcgtggatggcattgaccacgataccttacatcaagcaggaatg
ttccgtgtggaaaacggtgcgttagtgaagtga
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