Bacillus amyloliquefaciens LFB112: U722_05480
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Entry
U722_05480 CDS
T02965
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bamf
Bacillus amyloliquefaciens LFB112
Brite
KEGG Orthology (KO) [BR:
bamf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamf03400
]
U722_05480
Enzymes [BR:
bamf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U722_05480
DNA repair and recombination proteins [BR:
bamf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
U722_05480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
HTH_MCM7
Motif
Other DBs
NCBI-ProteinID:
AHC41580
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All DBs
Position
1058838..1062338
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AA seq
1166 aa
AA seq
DB search
MGVEFLVGRSGSGKTRLIIDSIQDELRREPFGKPIIFLVPDQMTFLMEYELAKTPDIGGM
IRAQVFSFSRLAWRVLQHTGGMNRPFVTTTGVQMLLRKLIEEHKHDFKVYQKASDKAGFT
EQVERMLTEFKRYCIEPEDVRRMAESGTASEYRGERMLSEKLHDLGILYQQMERSLAGHY
LHSEDYLTLLAQQIPLADVVKGARVYVDGFYQFTPQELRVLEQLIMHAEHVTFSLTADSP
SAEQAPDELDLFRMTGSTYYKLYQTAKELNADISCKELHGTKRHRHVPELACIESQYDVR
PAAAYTGGQEAFTVMQAQNRRAELEGIAREIQSLVRDGGYRYKDMAILIRQPEDYKDLLK
EVFADYGLPYFIDGKASMQHHPLIEFIRSSLDVVKGNWRYEAVFRCAKTELLFPLDQPEQ
KIREQVDQLENYCIAYGIKGERWTNGERFVYRRFVSLDEDFAQTDQEIEMEHMLNETREW
IAAPLVRLQNRMKKAKTVQSMAEALYLFLEDTDVPLKLDRKRQRAEEAGNMIEAQQHGQA
WDAVIQLLEEFAGMMGEDEISLALFQQMLETGTESLHFSLIPPALDQVFVGNMDLSRMYG
TSCTFVIGANDGVLPARPDENGVLSDDDREWLKAVGVELSSAGRERLLDEHFLIYMALSS
PSDRLYVSYPIADAEGKTLLPSIVVNRLGELFPDHQEKLSAADPEQVSEEEQLQYLVNKQ
VAQTYTASQLRLWTREYEISDVWWSAYNVLMKESDHQRAKKLFSSLFFRNEAKRLERPVS
RQLYGEHIKGSVSRMEAFNACQFSHFASHGLQLKERQFFKLEAPDIGQLFHSSLKLISDR
LREQKLEWRDLTKDQCRHFSYEAVERLAPKLQKEILLSSNRHFYVKEKLQKIVTRVSGIL
SEHAKASGFVPVGLELGFGGSGPLPPLTFTLKNGCTMELVGRIDRVDKAESSKGLLLRIV
DYKSSDRGLDLAEVYYGLALQMLTYLDLSITHSADWLGMKATPAGVLYFHIHDPMIQASL
PMGLDEIEQEIFKKFKMKGLLLGDREAISLMDTTLEEGRSNIVNAGLKKDGSLRSDSAAV
SEQDFHLLTDHVRRTFEQAGEAITDGLVSITPYKLKDKTPCTYCAFKSVCQFDESLKENE
YRSLKAEKDGTILDWLKKEADDDANS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
ttgggtgttgagtttttagtaggcagatcggggagtgggaaaacgaggctgattatcgac
agcattcaagatgaactgcgccgggagccgttcgggaaaccgatcatttttctagtcccg
gatcaaatgacgtttttaatggaatatgagcttgctaaaacgccggatatcggcggcatg
atacgcgctcaagtgttcagtttttcgcgtttggcgtggcgcgtgcttcagcataccggg
ggcatgaaccgtccgtttgtgacgacgacgggtgtgcagatgcttttaaggaaactgatt
gaagaacataagcacgattttaaagtgtatcaaaaagcgagtgacaaagccggattcact
gagcaggtggaacggatgctgacagagtttaagcgatactgtattgagcctgaagacgtc
cgccgcatggcggaaagcggaacggcgtcagagtatcgcggagagcggatgctgtctgaa
aaacttcatgacttaggcattttatatcagcagatggaaagaagcctcgccggacactat
ctgcattcggaggactatttgacgctgctcgctcagcagattcctttggcggacgttgta
aaaggcgcccgtgtttacgtcgacggattctatcaatttacgccgcaggaattaagggtg
ctggagcagctgatcatgcatgctgaacatgtcacattctcgctgacggcggacagccct
tcggcggaacaggcaccggatgagctcgatctgttcagaatgacgggaagcacatactat
aagctttatcagacggcaaaggaattgaatgccgatatttcctgcaaggaactgcatggc
acgaagcggcatcggcatgtgccggagcttgcctgtatagagtcgcagtacgatgtgcgt
cccgccgccgcgtataccggcggacaggaagcttttaccgtcatgcaggcgcaaaacaga
agagctgagctcgaaggtattgcccgggaaattcaatcgcttgtccgggacggaggatac
cggtacaaagatatggcgattctcatccgtcagccggaagattataaagatttgctgaag
gaagtgtttgccgattacgggcttccttattttattgacggaaaagcttctatgcagcat
cacccgcttattgaattcatccgttcaagcctggatgtcgtgaaggggaactggagatac
gaagcggtgttccgctgtgcgaaaaccgaactgttattcccgcttgatcagccggagcag
aaaataagagagcaggtagatcagcttgaaaattactgtatcgcctacggcattaaaggg
gagcgctggacgaacggcgagcggtttgtatacaggcgcttcgtatcgctcgatgaggat
ttcgcgcagacggatcaggaaatcgagatggaacacatgctgaatgagacgagagagtgg
atagctgcaccccttgtccggctgcagaaccggatgaaaaaagcgaaaacggttcaaagc
atggcggaggctctttatctctttttggaagataccgatgttcccctgaagctggaccgg
aaaaggcagcgggccgaagaggccggaaacatgatcgaagcgcagcagcacggccaggcg
tgggatgccgttatccagcttctcgaggagtttgccggcatgatgggtgaagatgaaata
tctttggcgctgttccagcaaatgcttgaaacgggaacggaatcgcttcatttttcttta
attcctcctgcgcttgaccaagtatttgtagggaatatggatctctcaagaatgtacggc
acgtcctgcacattcgtcatcggggccaatgacggcgttcttccggcgcgcccggatgaa
aacggcgtgctgtctgatgatgaccgggagtggctgaaagcggtcggagtggagctgtct
tccgcggggcgtgagcggctgcttgatgagcattttctcatctatatggcgctgtcgagt
ccgtctgaccgtctttatgtgtcatacccgattgccgatgcggaaggaaaaacgctcctg
ccgtcaatcgttgtaaacaggcttggcgagctgtttcccgatcatcaggaaaagctgtca
gcggctgatcccgagcaggtaagcgaagaagagcagcttcagtatctcgtcaataaacag
gtggctcagacgtatacggcaagtcagctcaggctgtggacaagagagtacgagatcagt
gacgtatggtggagcgcatacaatgtgctgatgaaagagtctgatcaccagcgtgcgaaa
aagctgttttcaagcctgtttttccgcaatgaggcgaagcgtcttgaacggcctgtttcg
cgccagctttacggcgagcatattaaaggaagcgtctcccggatggaggcgtttaatgcc
tgccagttttctcattttgcatctcacgggctgcaattaaaagagcggcagtttttcaag
ctggaagcgccggatatcggccagctgtttcactccagtctgaagctgatttcagaccgg
cttcgtgagcagaagctggaatggcgcgatctgacgaaagatcagtgccggcatttctcc
tatgaagcggtggaacggcttgcgccaaagctgcaaaaagagattctgctcagctcaaac
agacacttttacgtgaaggaaaaactgcagaagatcgtcacgcgtgtttctggcatatta
agcgagcatgcgaaggcgagcggtttcgtcccggtcggtcttgaactcggtttcggcgga
agcggaccgctgcctccgctcactttcacgctgaaaaacggctgtacgatggaactcgtc
ggacggatcgaccgcgtggataaagcggaaagttcaaaaggcctgctgctgagaatcgtt
gattataaatcaagcgacagggggcttgatctggctgaggtgtattacgggctcgctctg
caaatgctcacatatcttgacttatcgattacacattctgcggattggctcggcatgaaa
gcgaccccggcaggcgttttgtatttccatatccatgatccgatgattcaggccagtctg
ccgatggggcttgatgaaatcgagcaggaaattttcaagaaatttaaaatgaaaggcctt
ctcctcggtgaccgggaggcgatcagcctgatggacacgactttggaggaagggcgttca
aatatcgtcaatgccggtttgaaaaaggacgggtctttaagatccgactcagcggcggtc
agcgaacaggactttcatctgctgacagaccatgtgcggcggacatttgaacaggcgggc
gaagcgataacggacgggcttgtgtccattaccccgtataagctgaaagataagacgcct
tgtacgtactgtgcgtttaaatcggtgtgccagtttgatgagtcgcttaaggaaaatgaa
taccgcagcctgaaagcggaaaaagacggcaccatactggattggctgaaaaaggaggcg
gatgatgatgcaaattcctaa
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