Bacillus amyloliquefaciens LFB112: U722_08250
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Entry
U722_08250 CDS
T02965
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bamf
Bacillus amyloliquefaciens LFB112
Pathway
bamf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U722_08250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamf03400
]
U722_08250
Enzymes [BR:
bamf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U722_08250
DNA repair and recombination proteins [BR:
bamf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U722_08250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PIF1
Zn_ribbon_6
T2SSE
Cas3-like_C_2
Cas12f1-like_TNB
AAA_19
AAA_30
TrwB_AAD_bind
TSP1_2
ATPase_2
Zn_ribbon_ISL3
HypA
nSTAND3
IBR_1
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AHC42100
LinkDB
All DBs
Position
1603291..1605702
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AA seq
803 aa
AA seq
DB search
MNVAEVIVDVSSKNIDRPFDYKIPDHLKGMIEVGMRVIVPFGPRKLQGFVTGLKDSSELN
GGSMKEVEKLLDLTPVLTEELMQLSSWLSDKTLSFKITALQAMLPAALKAKYEKELKVVD
EEALTPDIKQLFRNQKSLLYSDITDESILSSLQKFVRKGSIDVTYKVAQKTNKKMIRMIE
AGADKEELARHADSLTKQASKQLAVLTYFIGGGEKISAAELCQKTDSSSATLKTLLKKGL
LTESFEEVYRDPYQDRMFKKTEPLSLTEEQQAAFEPIKQAVADHVHHVFLLHGVTGSGKT
EIYLQSIEKVLAKGKEAIVLVPEISLTPQMVNRFKGRFGSQVAVMHSGLSTGEKYDEWRK
IQRKEVRLVVGARSAIFAPFENLGMIIIDEEHESSYKQEEMPRYHAKDVAIRRAEHHSCP
VVLGSATPTLESFARAKKGVYELLPLKHRVNRQLMPDVSLVDMREELRNGNRSMFSRELM
EQLEEKLAKKEQAVLFLNKRGYSSFVMCRDCGYVPQCPHCDISMTYHRYGQRLKCHYCGH
EEPVPGTCPECGSEHIRFFGTGTQRVEEELTKVLPQARVIRMDVDTTSRKGAHEKLLSAF
GEGKADILLGTQMIAKGLDFPNVTLVGVLSADTTLHIPDFRAAEKTFQLLTQVSGRAGRH
EKPGTVVIQTYTPSHYSIQLTKTHDYETFFQQEMAHRRAQSYPPYYYVALVTVSHEEAAK
AAVTAEKITNYLRAGCGPDTKILGPAASPIARIKDRYRYQCVIKYRQENELQIQLKKILE
HYKRDIAQKHVMISIDMNPYMLM
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagcagaagtcattgtcgatgtcagctccaaaaacattgacagaccctttgat
tacaaaattcccgatcatttaaaagggatgatcgaagtcggcatgcgggtgattgtcccg
tttggcccgcgcaagcttcaaggatttgtgaccggtttgaaagattcgtccgaattaaac
ggcggctcaatgaaggaagtcgagaagcttcttgatttgacgcccgttctgactgaggaa
ctgatgcagctgtcttcatggctttctgacaaaacgctgtcgtttaaaatcacggcgctt
caggcaatgctgcccgccgcattgaaggcgaagtacgagaaagagctgaaagtcgttgac
gaagaagcgctgacaccggacatcaaacagcttttcaggaatcaaaaaagtcttctgtac
tcggatattaccgatgaaagcattctttcgtcacttcagaaattcgtgcgtaaaggaagc
attgatgtcacatataaagtcgcccaaaaaacgaataaaaaaatgatccgcatgatcgaa
gcgggggcagacaaagaagaactcgcccggcacgcagattcattgacaaagcaggcttct
aaacagctcgccgtgcttacttattttatcggcgggggagaaaagatttccgcggctgaa
ctttgccaaaagaccgattccagttccgcgacgctgaaaacgcttcttaaaaaggggctt
cttacggaaagctttgaggaggtttaccgtgatccttatcaggacagaatgttcaaaaaa
acagagccgctctctcttacagaagagcagcaggccgcttttgagccgattaaacaagct
gtagccgaccatgtccatcacgtctttctgcttcacggcgtcacgggaagcggcaaaacg
gaaatttacctgcaatccattgaaaaagtgctggcaaaaggaaaagaagccatcgtgctc
gttccggaaatctcgttgacaccgcaaatggtcaaccgttttaaaggccgcttcggctca
caggttgcggtcatgcacagcggattatccacaggtgaaaaatacgatgaatggcggaag
attcagcgcaaggaagtccggcttgtcgtcggagccagatcggccatctttgccccgttt
gaaaatctcggcatgatcattattgatgaagagcacgaatcttcctataagcaggaggaa
atgccgcggtatcatgcaaaggacgtagctatccgccgggccgagcatcacagctgtccg
gtcgtcctcgggagcgccacgccgacattggagtcatttgcgcgggcgaaaaaaggcgtt
tatgagctgcttccgttaaaacatcgcgtaaaccgccagctcatgcctgacgtttctctc
gttgatatgagagaagaactgagaaacggcaacagatcaatgttctcaagagagctgatg
gaacagctggaagagaagcttgcaaaaaaagagcaggccgtcctttttctgaataaacgg
gggtattcctcgtttgtgatgtgccgggattgcggttatgtgccgcaatgtccgcattgc
gacatttccatgacttatcaccgctacggacaaaggctgaaatgccattactgcggccat
gaggaacctgtcccggggacatgcccggaatgcggcagcgaacatatccgctttttcggc
acgggaacgcagcgtgtggaggaggagcttaccaaagtgctgcctcaggcgcgtgtgatc
aggatggatgtggacaccacttcaagaaaaggcgcccatgaaaaactgttgtcagcgttc
ggtgaagggaaagcggatatcctgctcggtacgcagatgatcgcaaaagggcttgatttt
ccgaacgtgacgctcgtcggagtattaagcgcagatacgacgcttcacatcccagatttc
agagccgcggagaagacattccagctgctgacgcaggtaagcggacgggccgggcggcat
gaaaagccgggaacggtggtcattcaaacgtatacaccgtctcattacagcattcagctg
acgaaaacgcacgactatgaaactttttttcagcaggaaatggcgcacagacgggcccag
tcatacccgccgtattattacgtggcgctggtgaccgtttctcatgaagaagcggcaaaa
gccgcggtcaccgcagaaaagattacaaactatttaagagcgggatgcgggcctgatacg
aaaattctcgggccggcggcttccccgattgccaggatcaaagatagatatcgctatcaa
tgcgtgataaaatacagacaggaaaacgagttgcagattcagttgaaaaagatactggag
cactataaacgcgacattgcgcaaaagcatgtaatgatttcaattgatatgaatccgtac
atgctgatgtaa
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