Bacillus amyloliquefaciens LFB112: U722_08730
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Entry
U722_08730 CDS
T02965
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bamf
Bacillus amyloliquefaciens LFB112
Brite
KEGG Orthology (KO) [BR:
bamf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bamf03016
]
U722_08730 (truB)
Enzymes [BR:
bamf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
U722_08730 (truB)
Transfer RNA biogenesis [BR:
bamf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
U722_08730 (truB)
Prokaryotic type
U722_08730 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DUF2922
Motif
Other DBs
NCBI-ProteinID:
AHC42196
LinkDB
All DBs
Position
1695994..1696923
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AA seq
309 aa
AA seq
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MVNGVLLLHKPVGMTSHDCVMKIRKLLKTKKVGHTGTLDPEVSGVLPICVGRATKIVEYV
TDKSKTYDAEITLGFSTSTEDQTGETVSVKPVREPLEEADIKAVLDELKGPQEQVPPMYS
AVKVNGKKLYEYARAGIEVERPKRNITIEDIALTSLVTYNEDTASFRFTVTCSKGTYVRT
LAVTIGEKLGYPAHMSHLIRTASGDFSLDECFTFEELEQQVSDGTVAEHAVPIDRALNHL
PKWVISDTLAKKAENGSVFDIPAEFSAMTADARIAVCTEDGECVAIYMPHPSKKGLLKPA
KVLMQKSEQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggttaacggagttctccttttacataaaccggtcggcatgacttctcacgactgtgta
atgaaaataagaaaactgttaaaaacaaagaaagtcgggcatacgggaacccttgatccg
gaagtgtcaggcgtactgccgatctgtgtcggacgggctacaaagatcgttgagtacgtc
accgacaagtcaaaaacgtacgatgctgagatcactctcggtttctccacatcgaccgaa
gatcagactggagaaacggtcagcgtaaagcctgtcagggagccgctggaagaagcggat
atcaaagccgttttagacgaattgaagggaccgcaggagcaagtgccgccgatgtattcc
gcggtaaaggtcaacgggaaaaagctctatgaatacgccagagcgggtattgaagtggag
cggccgaagcggaatatcacgattgaagatatcgcgctcacttcccttgtcacttataac
gaagacacagcatcattccgctttacagtcacgtgctcaaaaggcacttacgtcagaacg
ttggcggtgacaatcggtgaaaaactcggctatcccgcgcatatgtcgcatctcatccgc
actgcttcgggcgatttcagccttgatgaatgtttcacgtttgaggaacttgaacagcag
gtttcggacggaacggttgcagagcatgccgtgccgatcgatagagcgctcaatcatttg
ccgaaatgggtcataagtgatacattagctaagaaagctgaaaacgggtcagtgtttgac
atcccggcggaattttctgcaatgacagctgatgcccgtatagcggtctgtactgaagac
ggagaatgtgtggccatttatatgccgcatccttcaaaaaaaggactgctgaaaccggct
aaagtgctcatgcaaaaaagcgaacaataa
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