Bacillus amyloliquefaciens LFB112: U722_12065
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Entry
U722_12065 CDS
T02965
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bamf
Bacillus amyloliquefaciens LFB112
Brite
KEGG Orthology (KO) [BR:
bamf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bamf03016
]
U722_12065
Enzymes [BR:
bamf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
U722_12065
Transfer RNA biogenesis [BR:
bamf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
U722_12065
Prokaryotic type
U722_12065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
NAD_binding_10
DUF3256
Motif
Other DBs
NCBI-ProteinID:
AHC42802
LinkDB
All DBs
Position
complement(2429510..2430436)
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AA seq
308 aa
AA seq
DB search
MELLFLGTGAGMPAKTRNVTSVALKLLEERRSVWLFDCGEATQHQILHTTIKPRKIEKIF
ITHLHGDHVYGLPGLLGSRSFQGGEEELTIYGPKGIKAFIETSLNVTATHLTYPLTVHEI
EEGTVFEDEHFIVTAASVIHGVEAFGYRVQEKDIPGALQAGRLKEMNIPPGPVYQKLKKG
ETVTLDDGRIINGREFLESPKKGRIVAFSGDTRASERVTELARNADVLVHEATFAKEDAK
LAHNYYHATTEQAAQTAKKAGAKQLILTHISARYQGESPIERLEHEAKAVFENSKIAFDF
MEVTVERS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtggaattattatttttagggacgggggccggcatgccggcaaagacgagaaacgtaacg
tccgtcgcgctgaagcttcttgaagaaaggcgttccgtatggctgtttgattgcggagaa
gccactcagcatcagatattacatacaacaatcaaaccgaggaaaatagaaaagattttc
atcacccaccttcatggcgaccatgtttacggtcttccgggtctgttggggagccgttca
tttcagggcggtgaagaagagctgacgatttacgggccaaaaggcattaaagcctttatc
gaaacaagcctgaacgtgacggcgactcatctgacgtatcctcttaccgtacatgaaatc
gaagaggggacggtttttgaagatgagcacttcattgttaccgcagcatccgtcattcac
ggtgtggaagcgttcggctaccgggttcaggaaaaggatattcccggcgcattgcaggcc
ggcagattgaaagaaatgaatatcccgcccggacctgtctatcagaaactcaaaaaaggc
gaaacggtcacacttgacgatggcagaatcattaatgggcgggagtttctggaatccccg
aaaaaagggagaatcgtcgctttttccggggatacgagggcatcagagcgggtaacggag
cttgcgcgcaatgcggatgtgcttgttcatgaagcgacgtttgccaaggaagatgcaaag
ctcgcacataattattatcacgcgacgacagaacaggctgcgcaaacggcaaaaaaagca
ggcgccaaacagctgatcttaactcatatcagcgcaaggtatcagggagaatcgccgata
gagcgtctcgaacatgaggcgaaagcggtatttgaaaacagtaagatcgcatttgacttc
atggaggtcactgtggagcggtcttaa
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