Bacillus amyloliquefaciens LFB112: U722_12735
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Entry
U722_12735 CDS
T02965
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bamf
Bacillus amyloliquefaciens LFB112
Brite
KEGG Orthology (KO) [BR:
bamf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bamf03019
]
U722_12735
03009 Ribosome biogenesis [BR:
bamf03009
]
U722_12735
Enzymes [BR:
bamf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
U722_12735
Messenger RNA biogenesis [BR:
bamf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
U722_12735
Ribosome biogenesis [BR:
bamf03009
]
Prokaryotic type
rRNA helicases
U722_12735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHC42934
LinkDB
All DBs
Position
complement(2540487..2541803)
Genome browser
AA seq
438 aa
AA seq
DB search
MKETKFDGYNLKPFIIDAVHRLGFYEPTDIQKRLIPAVLKNESVIGQSQTGTGKTHAYLL
PILNRIDPGSDTVQAVITAPTRELANQIHQEALKITQGAEDEPIRTKCFIGGTDKQKSID
KLKTQPHLVVGTPGRIADLIKAQALNVYKAQSLVIDEADLMLDMGFLEDVDYIGSRMPEE
LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKRITAEKIEHVLVPSKQRDKDKLLFDMM
SHLNPYLGIVFANTKNTADHIAKYLTEKGMRIGLLHGGLTPRERKKVMKQINDLEFTYVI
ATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQALTIYELSDEDALVRL
EKMGIVFDYAELVNGEWKKGDDRHRRKKRKKSENEADQMAKRLVKKPKKVKPGYKKKMSY
EMEKIKRKQRRNKSNKGK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaactaaatttgatggatacaacttaaaaccgtttattatagatgcagttcac
cgccttggtttttatgaaccgacagatattcaaaagcggctgatacccgccgtgctgaaa
aacgaaagcgtgatcgggcagtcccagacggggacggggaaaacccacgcctatttattg
ccaattttgaatcggattgatccgggttctgatacggtgcaggctgttatcacggcgccg
acgagagagcttgccaatcagattcatcaggaagcgctcaaaatcacacagggtgcggaa
gatgagccgatccggacgaaatgtttcatcggagggacggacaagcaaaaatcaattgat
aagctgaaaacacagcctcatctcgtcgtcggaacgccgggccggatcgcggatctgatt
aaggcgcaggcattgaacgtctataaagcgcagtctctcgtcattgacgaagcagatctg
atgcttgacatgggctttttagaagacgttgattatatcggatcgcggatgccggaagaa
cttcagatgcttgtgttctcagctacgattccggaaaagctgaagccgtttttgaaaaag
tatatggaaaatccgaagtacgcgcatgttgagccgaaaagaatcacagccgaaaagatt
gaacatgttttggttccttctaaacagcgtgataaagacaagctgctttttgatatgatg
tctcatctgaatccttatctgggcattgtgtttgccaatacgaaaaacacggctgaccat
attgcgaaatacctgactgaaaagggcatgaggatcggtcttctgcatgggggattaacg
ccgcgtgagcgtaagaaggtaatgaaacagattaatgatctggaattcacttatgtcatt
gcgacagaccttgcggcaagaggaattgacattaaaggcgtaagccacgtcatcaactat
gagcttccggacgatctggatttttatgttcaccgcgtcgggagaaccgcacgcgccggt
tcatcaggccaagcactgaccatttatgagctttctgacgaagatgcgctcgtaagactc
gaaaagatgggtattgtgtttgactatgcggagcttgtaaacggcgaatggaagaaaggc
gatgaccgccatcgccgcaaaaaacgcaaaaaatcggagaatgaggccgaccaaatggcg
aagcgcctcgtgaaaaaaccgaaaaaagtgaagccgggctataaaaagaaaatgagctac
gaaatggaaaagataaaaagaaagcagagaagaaacaaatctaataaaggaaagtag
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