Bacillus amyloliquefaciens LFB112: U722_12960
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Entry
U722_12960 CDS
T02965
Name
(GenBank) competence protein ComE
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
bamf
Bacillus amyloliquefaciens LFB112
Pathway
bamf00240
Pyrimidine metabolism
bamf01100
Metabolic pathways
bamf01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
bamf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
U722_12960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bamf02044
]
U722_12960
Enzymes [BR:
bamf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
U722_12960
Secretion system [BR:
bamf02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
U722_12960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
XOO_2897-deam
SNAD4
iHKD
APOBEC2
NAD1
Motif
Other DBs
NCBI-ProteinID:
AHC42979
LinkDB
All DBs
Position
complement(2586054..2586623)
Genome browser
AA seq
189 aa
AA seq
DB search
MERISWNQYFMAQSHLLALRSTCPRLSVGATVVRDKRMIAGGYNGSIAGGVHCADEGCLL
IDNHCQRTIHAEMNAILQCSKFGVPTEGAEIYVTHYPCIQCCKSIIQAGIKTVYYAEDYK
TQPYAKELFSQAGVKVEQVELDEMIIDLKNREKLSFVAGLIQQLSDAGVKADELKKIHEQ
ANELFTSYV
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtggaacgaatctcatggaatcaatattttatggcgcaaagccatttgctggcgctgaga
agcacatgtccgagactgtcagtcggggcaaccgtagtcagagataagcggatgattgcc
ggcggatacaacggctcaatcgccggcggcgtccattgcgctgatgaaggatgcctttta
atagataatcattgccagaggaccatacatgcagagatgaatgcgattctgcaatgttct
aagttcggtgttccgacggagggcgccgaaatttatgtgacacattatccttgtattcaa
tgctgcaaatcaattatccaggcaggcatcaaaacggtctattatgccgaagattacaaa
acacagccttatgcaaaagagctgttcagccaagccggagtcaaggtggagcaggtcgaa
cttgatgaaatgatcatcgatctgaaaaaccgcgaaaaattgtcttttgtcgcaggtctg
attcagcaattatctgatgcgggagttaaggcagatgaactgaaaaaaattcatgaacag
gccaatgagctgtttaccagttacgtataa
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