Bacillus amyloliquefaciens LFB112: U722_13340
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Entry
U722_13340 CDS
T02965
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bamf
Bacillus amyloliquefaciens LFB112
Pathway
bamf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U722_13340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamf03400
]
U722_13340
Enzymes [BR:
bamf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
U722_13340
DNA repair and recombination proteins [BR:
bamf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U722_13340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
HHH_5
AAA_22
UvrD_C
T2SSE
AAA_12
nSTAND3
AAA_16
DEAD
NPHP3_N
AAA
NTPase_1
AAA_28
AAA_17
Rad17
Zeta_toxin
TsaE
ABC_tran
AAA_18
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AHC43052
LinkDB
All DBs
Position
complement(2651648..2654026)
Genome browser
AA seq
792 aa
AA seq
DB search
MDQLNIEEQPYVKGVIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDE
TYTFYGKTATHPKFGLQFQAEHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGD
GALNKILADASVLYDVPKMSKKKADKLAGELQRHQGLEQIMISLNQYGFGPQLSMKIYQA
YETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERIKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLFYA
EQNVAKRVLDIAAQTEYADQFPESEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLL
TGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPVLLAAPTGRAAKRMSESTGLP
AVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHLFKALPKHIQLIVVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTK
DRSFIRCNSSQIKEVVDQVVSNALKKGYTSRDIQVLAPMYRGKAGINELNMLLQDIMNPP
KEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIVSIFYAKENTEKEDMVVVSFD
GNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVYDANIGME
GITPFDFMEEKA
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
gtggatcagctgaacatcgaagaacagccgtatgtaaaaggcgtcattcatacggtcatt
tatcataatgacaccaacctgtatacagtgctgaaagtcaaggttgcagaaacgtctgag
gcgatcgaagacaaggtcgtatccgtaacgggctacttccctctgctgcaagaagatgag
acctatacattttacggaaaaactgccacgcatcctaagttcggcctgcaatttcaggct
gaacactttaaaaaagaaattccgaccacaaaagaaggaatcattcactatttatcaagt
gatctgtttgaaggaatcggaaaaaaaacggcggaagaaatcgtcaaaaagcttggagac
ggcgcgctcaataaaattctggctgatgcgtcggtgctttatgatgtgccgaaaatgtca
aaaaagaaagcggacaaactggcgggagagctgcagcggcatcaggggcttgaacagatt
atgatctctctgaaccaatacggtttcgggccccagctatccatgaaaatatatcaggcc
tacgaaacggaaaccttggagaaaattcaggaaaatccttatcagcttgtaaaagacgtt
gaaggcatcggctttgtgaaagctgacgagctgggcggaaaaatgggtctgtcaggaaac
cacccggagcggatcaaagcggcaatcttatatacgattgaatcgacctgtctttcagag
ggccatacgtacatagagacaaagcagctgattatcaatacgcaaacgctcctgaatcag
tcagctgaaggcggccgcgtcacggaaatggatgcggctgacggcatcatcgccctcggg
gagagtaaggatatcgtcatcgaaggagagcgctgctattttccgtccttgttttacgcg
gaacaaaacgtcgcaaaacgcgtgctcgacattgcggctcagacggagtatgccgatcaa
tttcctgaatcggaatttctgcttgcactcggtgaactggaagaacggatgaatgttcaa
tacgcaccaagccaaaaggatgccattcaaaaagcgctgtcttcaccgatgcttttactg
accgggggacctggaacggggaaaacgaccgttattaaaggaatcgtggaattatacagt
gaactgcacggcgtatcccttgaccccggtgattataaaaaagacgaggcgtttccggtg
ctgcttgccgcgccgaccggaagagccgcaaaacggatgagcgaatctacgggtctgccg
gctgttacgattcacaggctgctcggctggaatggcgctgaaggctttacctacaacgaa
gatcagccgattgaagggaaactgatcattatagacgaagcgagtatgcttgatatctgg
ctcgccagccatttgtttaaggcgcttcctaagcacattcagctcattgttgtcggtgat
gaagaccagcttccttcagtaggaccggggcaggtgctcagagatcttttggcttctgag
gtgctgccgaccgtgcgcctgacagatatttaccgtcaggctgaaggatcatccattgtg
gaacttgcccatgatatgaaaaaaggactgcttccaaaggggctgaccgcgccgacaaag
gaccgctcatttatccgctgtaattcttcacagattaaagaagtcgtggatcaggtcgtc
tcgaacgcgttaaaaaaggggtatacctccagagatattcaagtgcttgccccgatgtac
aggggaaaagcgggaattaacgagctgaatatgcttcttcaggacatcatgaatccgccg
aaagaaaaaaggcgggagctgaaattcggagatgtcgtctacaggacgggcgataaaata
ttgcagcttgtcaaccagccggaaaacaatgtgtttaacggcgatatcggcgaaatcgtg
tccattttttatgccaaagaaaatacagaaaaagaagacatggtcgtcgtctcgtttgac
ggcaacgaaatcacctttacgaaaaaggatttcagccagtttacccacgcttactgctgt
tccattcataagtcgcaggggagcgaattcccgattgtcgtcctgcctgtcgtcaaaggc
tactatcgaatgctcaggagaaatctgctttataccgccattacaagagccaaaaaattc
ctgattctttgcggagaagaagaagcgcttgaatggggcgtcaaaaacaatgatgccacc
gtcagacagacgtcgcttaaaaacaggctcacagagcagactgaagagatggatgcagaa
ctggccgccctgcaaaaagagctgccgttcagtgtatatgatgcgaacatcggaatggaa
ggcatcacgccttttgactttatggaagaaaaagcgtaa
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