Bacillus amyloliquefaciens LFB112: U722_14160
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Entry
U722_14160 CDS
T02965
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bamf
Bacillus amyloliquefaciens LFB112
Pathway
bamf03030
DNA replication
bamf03410
Base excision repair
bamf03420
Nucleotide excision repair
bamf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U722_14160
03410 Base excision repair
U722_14160
03420 Nucleotide excision repair
U722_14160
03440 Homologous recombination
U722_14160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bamf03032
]
U722_14160
03400 DNA repair and recombination proteins [BR:
bamf03400
]
U722_14160
Enzymes [BR:
bamf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U722_14160
DNA replication proteins [BR:
bamf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
U722_14160
DNA repair and recombination proteins [BR:
bamf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
U722_14160
NER (nucleotide excision repair)
GGR (global genome repair) factors
U722_14160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
UBA_3
HHH
Motif
Other DBs
NCBI-ProteinID:
AHC43211
LinkDB
All DBs
Position
complement(2810465..2813104)
Genome browser
AA seq
879 aa
AA seq
DB search
MTERKKLVLVDGNSLAYRAFFALPLLSNEKGIHTNAVYGFAMILMKMLEDEKPTHMLVAF
DAGKTTFRHSTFKEYKGGRQKTPPELSEQMPFIRELLDAYNISRYELPEYEADDIIGTLA
VSAEKDGFEVKVVSGDKDLTQLATGKTTVAITRKGITDVEDYTPEHVREKYGLTPLQIID
MKGLMGDSSDNIPGVPGVGEKTAIKLLKQFHSVEKLLDSIDEVSGKKLKEKLEEYKEQAL
MSKELATIMTNAPIEVKPEDLDYQGFDREQVVAIFKDLGFNTLLERLGEESGETAEENFE
DINVETAEEITEDMLVSPSALVVEQIGDNYHEEPILGFSIVNETGLYYIPKEIAIQSEAF
KSWAEDESMKKWVFDSKRSVVALRWQGIELKGTEFDALLAAYIINPGNSYDDVASVAKEY
GLNIVSKDEAVYGKGAKRAVPAEKELADHLARKASAVNSLRDKLLDALEENNQLELYEDL
ELPLALILGEMESMGVKVDVERLKRMGEELKAKLKEYEEKIHDIAGEPFNINSPKQLGVI
LFEKLGLPPVKKTKTGYSTSADVLEKLADKHDIVAYILQYRQIGKLQSTYIEGLLKVTRK
DSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEPDWLIFAADYSQI
ELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGIS
DYGLSQNLGITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELT
SRNFNLRSFAERTAMNTPIQGSAADIIKKAMIDMAAELKEKNLKARLLLQVHDELIFEAP
KEEIEILEKLVPEVMEHALALDVPLKADYASGPSWYDAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacgaaaaaaattagtgcttgtcgacggaaacagtctggcgtaccgggcgttt
tttgcattgccgcttttaagcaatgaaaaaggcattcatacaaatgccgtatacgggttt
gcgatgattttaatgaaaatgctggaggatgaaaaaccgacccatatgctggtggctttt
gatgcgggaaaaaccactttccgccacagcacgtttaaagaatataaaggcggaagacaa
aaaacgccgccggagctttcagaacagatgccgttcatccgtgagctcctcgatgcctac
aacatcagccgctacgagcttcctgaatatgaagcggacgatattatcggcacgcttgcc
gtatctgctgaaaaagacggcttcgaagtgaaggtcgtttcgggggacaaggacttaacc
cagcttgcaaccgggaaaacgaccgttgccattacgagaaaaggcattaccgacgtagaa
gattacacgccggagcacgtgcgggaaaagtacggtctgactcctttgcaaatcattgat
atgaagggattaatgggagattcatccgataacataccgggcgtccccggcgtcggagaa
aaaaccgcgattaagctcttaaagcagttccattcggttgagaaactgcttgattccatt
gatgaagtcagcggaaaaaaattaaaagaaaagcttgaagaatataaggaacaagccctg
atgagcaaagagctggcgacgattatgacaaatgcgccgattgaagtcaagcccgaagat
ttagattaccaagggtttgaccgtgaacaagttgttgccatttttaaagacctcggtttt
aatacgcttcttgagcggctcggtgaagaaagcggggaaacggcggaagaaaattttgaa
gacatcaatgtcgaaacggcagaagaaatcaccgaagatatgcttgtttcgccgtccgct
ttggtcgtcgaacaaatcggtgataactatcacgaagaaccgatcctcggcttttccatc
gtgaatgaaacaggtctttattatattccgaaagaaatcgccattcagtctgaagctttt
aaatcttgggctgaagatgaatcgatgaaaaagtgggtgttcgacagcaaacgttccgtc
gtcgctttgcgctggcagggaattgagctgaagggaacggaatttgacgcgcttcttgct
gcctacattataaacccgggcaattcgtacgacgatgtcgcgagcgtagcgaaagaatac
gggctgaatatcgtttcaaaagatgaagcagtatacggaaaaggcgcaaaacgcgccgtt
cccgctgaaaaagagcttgccgatcatctcgcgcggaaagcgtctgccgttaacagcctc
cgtgacaaactgcttgacgctttggaagaaaataatcagcttgagctttatgaagatctt
gaactcccgcttgcgctaattctcggagaaatggaatcaatgggcgtcaaagtggatgtg
gaaagactgaagcgaatgggagaagagctcaaggcaaaactgaaagaatatgaagaaaaa
atccatgacatcgccggtgagccgtttaacatcaattcaccaaaacagctcggcgtcatt
ctgtttgaaaaactcggtctgccgccagtaaagaaaacaaaaacaggctattccacttca
gctgatgtgcttgagaagctcgcagacaaacatgatatcgtcgcatacattctgcaatac
agacaaatcggcaaactccaatcgacttatattgaagggctgctgaaagtcacgcgcaag
gattctcataaggtgcatacacgattcaatcaggcattgactcaaaccggacgcctcagc
tcaacggatccgaacctgcaaaatattccgatccggctggaggaagggcggaaaatccgt
caggctttcgtaccgtccgaaccggactggcttattttcgccgccgattattcacaaata
gaattaagggtgcttgcgcatatttcaaaagatgaaaatctgatcgaagcgtttacgaat
gacatggacattcacacaaaaaccgccatggacgtgtttcatgtcagtgaagatgaagtg
acacaagcgatgcgccgccaggcaaaggccgtcaatttcgggatcgtttacggcatcagt
gattacgggctgtcgcaaaacctcggcatcacccggaaagaagcgggcgcttttattgac
cgctatttggagagcttcccgggcgtcaaggcgtatatggaagaatcggtgcaggaagcg
aaacaaaaaggatatgtgacgacacttatgcagcgccgccgctatatccctgagctgacc
agccgcaacttcaacctgcggagctttgcggaacggacggccatgaatacgccgattcag
ggaagcgccgccgatattattaaaaaagccatgattgacatggcagctgagctgaaagaa
aaaaacctgaaggcgcgactgttgcttcaggtgcacgatgaattgatttttgaagcgcct
aaggaagaaattgaaatattagagaagctggttcctgaagtgatggagcatgctttggca
ttagacgtgccgctgaaggcggattatgcttcagggccgtcttggtacgatgcaaaataa
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