Bacillus amyloliquefaciens LFB112: U722_20100
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Entry
U722_20100 CDS
T02965
Name
(GenBank) GntR family transcriptional regulator
KO
K18907
GntR family transcriptional regulator, regulator for abcA and norABC
Organism
bamf
Bacillus amyloliquefaciens LFB112
Module
bamf_M00700
Multidrug resistance, efflux pump AbcA
Brite
KEGG Orthology (KO) [BR:
bamf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bamf03000
]
U722_20100
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bamf01504
]
U722_20100
Transcription factors [BR:
bamf03000
]
Prokaryotic type
Helix-turn-helix
GntR family
U722_20100
Antimicrobial resistance genes [BR:
bamf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
U722_20100
Multidrug resistance, efflux pump NorB [MD:
M00702
]
U722_20100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
HTH_36
HTH_11
HTH_Crp_2
MarR_2
HTH_41
HTH_24
MarR
Motif
Other DBs
NCBI-ProteinID:
AHC44322
LinkDB
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Position
complement(3911864..3913312)
Genome browser
AA seq
482 aa
AA seq
DB search
MSAPEEKKMRKLPKYIQIIQFIKEKIGNGEWPIGSKIPSQRTLAKHFEVNRSTVITALEE
LTADGLIEGRMGKGTVVTNNTWTLLAKNSAPDWDQYVTSGIQQPSQKIVQEINKSESNSD
LIQLSKGELSHEIFPLAVMKEIMGKVSQNIEAFGYEEPKGYLPLREALSGYLRTIGIQAS
PSSILIVSGALQALQLISMGLLQRGSTVYLDQPSYLYSLHVFQSAGMKLTGVPMDHDGIL
PEHIRMARGERGRAILYTNPCFQNPTGILMSKKRREEILAASENTQLPIIEDDIYRELWI
DEIPPDPIKTIDKNGHVLYIGSLSKTLSPGLRIGWIVGPEPVIERLSDIKMQTDYGSSSL
SQRVAAEWFISGEYQQHLEQVRSQLKVRRELALSVLETHLKDVATWNIPKGGFFVWVKIL
PSISMKLLYTKALSKGILLNLGRIYAEEKGNYIRLSYAYASLEDLQKGIYELGLMIKELA
SR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctccagaagaaaaaaagatgagaaagcttcctaagtacatacaaatcattcaa
tttataaaagagaaaataggaaatggagaatggccgatcggaagtaagattccaagccag
cgcacgcttgccaaacactttgaggtgaacaggagcacagtcattacagctttagaggaa
ttgacggcggatggattaatcgaaggcagaatgggcaaagggacagttgttacgaacaat
acatggacacttttggctaagaattccgctcccgattgggatcagtatgtaacctccgga
attcagcagccaagccaaaaaatcgttcaagagatcaataaatcagaatcaaattctgat
cttatacagctcagtaaaggagaactttcacatgagatttttcctttagctgttatgaaa
gagatcatgggaaaggtatctcaaaacatagaggcattcggatatgaggaaccaaaagga
tatttgcctttgagagaggcattaagcggctatttaagaacaatcggcattcaagcttct
ccttcttccattcttattgtttcgggcgcactgcaagccttacagcttatatcaatgggg
cttttacaaaggggatcgaccgtttatcttgatcagccttcctatctttattcattacac
gtatttcaatcagccggtatgaagctgactggagttcctatggatcatgatggaattttg
ccggaacatatccgcatggcaaggggggaacgggggagggctatattatatacaaatcct
tgttttcaaaacccgacaggtattttaatgtcaaaaaagagacgagaagaaatccttgcg
gcaagtgagaatacacagcttcccattattgaagatgacatttatcgtgagttatggata
gatgagattcccccggatcctattaaaacaatagataaaaatgggcatgtgctttacata
ggcagtttatcgaaaacattaagtccgggcttgaggattggctggattgtcgggccggaa
ccagtgattgaacgtttatccgacataaaaatgcaaacagattacggctccagttcgtta
tcccagagagtagcggcagagtggtttatatccggtgaataccagcagcatctagaacag
gtgagaagtcaattaaaggtgagaagagaattggccttgagtgttttagaaactcatttg
aaagatgtggcgacatggaatatcccaaagggaggattctttgtctgggtaaaaatattg
ccttccatatccatgaaattactttataccaaagccttatcaaaagggattctgctcaat
ctcggcaggatctatgctgaggaaaaagggaattatattcgcttatcatatgcttatgca
tctcttgaagaccttcaaaagggaatttatgaattgggtttgatgattaaggaattggca
agcagataa
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