Bacillus amyloliquefaciens IT-45: KSO_000030
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Entry
KSO_000030 CDS
T02462
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
bami
Bacillus amyloliquefaciens IT-45
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bami03016
]
KSO_000030 (trmE)
Transfer RNA biogenesis [BR:
bami03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
KSO_000030 (trmE)
Prokaryotic type
Methyltransferases
KSO_000030 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
Ras
GTP_EFTU
MMR_HSR1_Xtn
Roc
Cyc-maltodext_C
AAA_16
AAA_22
ABC_tran
SPP1_Dit
AAA_29
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AGF25515
LinkDB
All DBs
Position
2691..4070
Genome browser
AA seq
459 aa
AA seq
DB search
MDTIAAISTPMGEGAIAIVRLSGPEAVKIADKMYKGPKGKTLSSAESHTIHYGHIADSTT
GRIIEEVMVSVLRAPRTFTREDVIEINCHGGIVTVNQVLQLALREGARLAEPGEFTKRAF
LNGRIDLSQAEAVMDLIRAKTDRAMNVAMNQMEGRLSALVRRLRDELLETLAHVEVNIDY
PEYDDVEEMTHQLLVEKASGVKKEIEALLRTSEQGKILREGLSTVIIGRPNVGKSSLLNS
LVHETKAIVTDIPGTTRDVIEEYVNVRGVPLRLVDTAGIRETEDIVERIGVERSRQVLKE
ADLILLVLNHSEALSEEDVKLFEAVEGMDVIVIMNKTDLEAKIDAERVKELAKGRPVVTT
SLLKEEGIQDLEEAIQSLFYTGAIESGDLTYVSNTRHISILHQAKQAIDDALNGIEQDVP
IDMVQIDLTRCWELLGEIIGDAVHESLIDQLFSQFCLGK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggatacaattgcagcgatttcaactccgatgggtgaaggcgcgattgcgatcgttcgg
ctgagcggcccggaagccgtaaagatcgccgacaaaatgtacaagggtccgaaaggcaaa
acgctcagttcggcagaatcgcataccattcattacgggcatatcgcggacagtacgacg
ggacggattattgaggaagtcatggtgtctgttttaagagcgcccagaacattcacaagg
gaagatgtcattgaaatcaactgtcacgggggtattgtgacggttaatcaggtgctccag
cttgctttaagagaaggtgcgagactggcagaacccggtgagtttacgaagcgcgcattt
ttaaacggacggattgacctttcacaggcggaagcggtgatggatctgatcagggccaaa
acggaccgtgccatgaatgtcgccatgaaccagatggaaggacggctttccgcgcttgtc
cgccgtctgcgtgatgagttgttagaaacacttgcccatgttgaggtgaatatagattat
ccggaatatgatgacgtcgaagaaatgacgcatcagcttttagtggagaaggcaagcggc
gtgaagaaagaaatcgaggcgctgctccgtacgtctgagcaggggaaaattttgcgtgag
ggactgtctaccgtgatcatcggccgtccgaacgtcgggaaatcctctctgcttaacagc
cttgtccatgaaacgaaggcgatcgtaaccgatattccgggaacgacgcgtgatgtgatt
gaggaatatgtcaacgtgcgaggcgtgccgcttcggcttgtcgataccgccggaatccgt
gagacagaagacatcgtcgaaagaatcggtgtggaacggtcacggcaggttctgaaggaa
gcggatctcattttgcttgtgcttaaccacagcgaagcgctttctgaagaagatgtgaaa
ttgtttgaagcggttgagggaatggacgtcattgtcattatgaataagacggaccttgag
gctaagattgacgctgagcgcgtcaaggaactggcgaaaggccggcctgtcgtcacgacc
tcattgttgaaagaagaaggcattcaagatttagaggaagcgattcagtcgctattttat
acaggagcgatcgaaagcggagatctcacctatgtcagcaacacccgtcatatttcgatt
ctgcatcaggcaaagcaagcgattgatgatgcgctgaacgggattgaacaggatgttccg
attgatatggtgcaaattgatttgacaaggtgctgggaactgctgggcgaaatcatcggt
gatgccgtccacgaaagcttaattgatcagctcttttcacaattttgtttaggtaaataa
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