Bacillus amyloliquefaciens IT-45: KSO_003365 Help Entry KSO_003365        CDS       T02462                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism bami  Bacillus amyloliquefaciens IT-45 Pathway bami02020   Two-component system bami02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:bami00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     KSO_003365  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     KSO_003365  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bami03021]     KSO_003365 Transcription machinery [BR:bami03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      KSO_003365 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_32 HTH_IclR Sigma70_r4 HTH_3 HTH_21 Sterile YtzH Motif Other DBs NCBI-ProteinID:  AGF26170 LinkDB All DBs Position 634485..635795 Genome browser AA seq 436 aa AA seqDB search MDIKLQQTQMLKPQLTQELKQAITLLGYNSAELAGYIDELSLENPLIERKETDTPPLSYH KTNKNRMKERDGSQQIRLTRKTLQDSLKQQALDMKLSDDEKKIFNYLIHSLDSNGYLKED IPAAADHVSASQEETEAVLKKLQSLEPAGIGARSLQECILLQLRRLPERNEQAEWIAEAY FELFARKNWKALTLKTGIPLKDIQDIADMISALDPRPGLRYAHEEPGFYVEPDIFITVKN GIIQARLNSRSFPDIQLHAHYQPLLSAAGCRDTKNYLSAKYQEWRWLNRALSQRKQTITR IIGVLTERQESFFLTGKSGMQPLTLREVAETLELHESTISRAIKGKYVQTPYGLYEMKTF FSAKAESSGDGGASNYAVKAHLEALVRKEDKKKPFSDQKLADLLHEQYDIRISRRTVAKY RDQLNIPPSSARKRYS NT seq 1311 nt NT seq  +upstreamnt  +downstreamnt atggatatcaaacttcagcaaacacaaatgttaaagcctcaattaacgcaagagcttaaa caggccatcacattactcggatacaattccgcggaactggccggatatattgatgagctc tcactggaaaaccctctgattgaacgaaaggaaacagacacgccgccactatcttaccat aaaacaaataaaaacaggatgaaagaacgggacggaagccagcagatcagacttacccgc aaaacgctgcaggattcgctcaaacagcaagccttagacatgaagctgtccgatgatgag aaaaaaattttcaattatctgatacattcattggattcaaacggttatttaaaagaggac ataccagccgccgccgaccatgtatccgcttcacaagaggagacggaagcggttctgaaa aagcttcaatcccttgagcccgcgggaatcggcgcccggtctttgcaggaatgcatcctt cttcagctccgccgtctgcccgagcggaacgaacaggcggaatggattgccgaagcctat tttgagctatttgcaagaaagaattggaaagcgcttacacttaaaacgggcattccgctt aaagacattcaggacatcgctgacatgatcagcgcgcttgatccgaggccggggctccgt tatgcgcatgaggagccgggtttttacgtagaaccggatattttcatcacggtgaaaaac ggcatcattcaagcgcggctcaacagccgttcgtttcctgacatccagcttcatgcccat tatcagccgctcttgtcagccgccgggtgccgtgacacgaaaaattatctgtcggcaaaa tatcaggaatggcgctggctgaaccgggctttgtcgcaaagaaaacaaacgatcacgaga attatcggcgtcctgactgaacggcaggaatccttttttctcacaggaaaaagcggaatg cagccgctgaccttaagagaggtggcggaaacgctggagctccacgaatcaacgatcagc cgggccatcaaagggaagtacgttcagacgccgtacggactgtatgaaatgaaaacattt ttctcggcgaaagctgaatcatcgggggacggcggcgcctccaattatgccgtaaaagcg catctggaagcattggtccgtaaagaagataaaaagaaacctttttcagaccaaaagctt gccgatctgctgcatgaacaatatgacatccgaatctcaaggcgcaccgtcgccaaatac cgtgaccaattaaatattccgccgtcatcggcgagaaaacggtacagctga

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