Bacillus amyloliquefaciens IT-45: KSO_005520
Help
Entry
KSO_005520 CDS
T02462
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bami
Bacillus amyloliquefaciens IT-45
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bami03016
]
KSO_005520
Enzymes [BR:
bami01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KSO_005520
Transfer RNA biogenesis [BR:
bami03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KSO_005520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AGF26601
LinkDB
All DBs
Position
1056747..1057298
Genome browser
AA seq
183 aa
AA seq
DB search
MKASLPHYFIGIPIPADIAEPIWEAAKKEPALSFKKWVHPHDYHITLIFLGAADEERLAK
LSSLLADAASAAQPFTVQFQHLDIFGDRRQPRVLHLEPERNELLFDLREKTKQAVLKAGF
QVEKRPYHPHMTMARKWAGDRPFSDDVPFESGRVQSAVSRFSLFQTHLDRSPKYEEIAQF
QLT
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcttcattgccgcattattttatcggcattccgattccggctgacattgctgaa
ccgatttgggaagcagccaaaaaggagccggcgttatcattcaaaaaatgggtgcacccg
catgactatcatattacactgatttttctcggagccgcggatgaagaacggcttgcgaaa
ttatcgtctttgctcgcagatgctgcgtcggcagcgcagccgtttactgtacagtttcag
catctggatattttcggcgaccgcagacagccgagagtgcttcaccttgagcccgaacgg
aatgaactgctctttgatttgcgggaaaaaacaaaacaggctgttttgaaagccggtttt
caagtggaaaaacggccgtatcaccctcatatgacgatggcgcggaagtgggcgggagac
cggccgttttctgacgatgtgccgtttgaaagcggcagggtgcaaagtgccgtcagccgg
ttttccctgtttcagacccatcttgaccggtcgcctaaatacgaagaaatcgcacagttt
caattgacataa
DBGET
integrated database retrieval system
