Bacillus amyloliquefaciens IT-45: KSO_006960
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Entry
KSO_006960 CDS
T02462
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
bami
Bacillus amyloliquefaciens IT-45
Pathway
bami00270
Cysteine and methionine metabolism
bami01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
KSO_006960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bami03000
]
KSO_006960
03032 DNA replication proteins [BR:
bami03032
]
KSO_006960
03036 Chromosome and associated proteins [BR:
bami03036
]
KSO_006960
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
bami02048
]
KSO_006960
Enzymes [BR:
bami01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
KSO_006960
Transcription factors [BR:
bami03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
KSO_006960
DNA replication proteins [BR:
bami03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
KSO_006960
Chromosome and associated proteins [BR:
bami03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
KSO_006960
Prokaryotic defense system [BR:
bami02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
KSO_006960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AGF26889
LinkDB
All DBs
Position
1329388..1330764
Genome browser
AA seq
458 aa
AA seq
DB search
MIKQQLGLFREIIVDNFAGGGGASTGIELATGLSVDIAINHDPAAIAMHQVNHPDTEHYC
ESVWEVDPREAAKGRPIGLAWFSPDCKHFSKAKGGKPVEKSIRGLAWVAVRWAATVSPRV
IILENVEEFQTWGPLGKDGRPDPDKKGYTFRSFVRALNRHGYKVEWKELKACDYGAPTIR
KRLFLIARRDGRPIIWPEPTHGDPKSVAVKSGKLKPWRTASEIMDWSLETPSIFNRKKPL
SENTMRRIARGIQRFVIDSQKPFVIGERGNSLIQMGYGDPEGRRVLDLKKPLGTITAGGN
KFAIATSHLIKLRGTCRDGQTVTNPMPTITAGGLHVGEVRAFLTKYYGSDTGQALSDPLH
TVTTKDRFGLVTIKGENYQIADIGMRMLQPHELFAAQGFPTNYVIDRDINGVAYSKKKQI
ERCGNAVPPPFAEQLVRANLPEFCVSEHMTKFTRLKAN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaacaactgggacttttcagagaaatcattgttgataacttcgcgggcgga
ggcggagccagtaccggaattgaattggctaccgggctttcggtggacattgcgattaac
catgatccggcggccatcgccatgcaccaagtaaaccaccctgatacagaacattattgt
gagtctgtttgggaagtagacccgagggaagcagccaaggggcggccgattggtttagcc
tggttctccccggactgcaagcatttttcaaaagccaaaggcggaaaacccgttgagaag
agcatccgggggcttgcatgggtagcggtcaggtgggcggcaacggtaagcccgcgggta
atcattcttgaaaacgtggaggaatttcagacgtgggggcctcttgggaaagacggaagg
ccggatccggacaaaaaaggatatacgttccgttcctttgtcagagcgttaaacagacac
ggatacaaagtcgaatggaaagagctgaaagcgtgcgactacggcgccccaacaattcga
aaaaggctgttcttaatcgctcgacgggatggccgaccgatcatatggcccgagccgaca
catggcgatccaaaaagcgtagcagtgaaatcaggaaagcttaaaccgtggcggactgcc
tccgagatcatggactggtcactggaaacaccgtcgattttcaacaggaaaaagcctctt
tctgaaaatacaatgcggcgcattgcccgcggcatacaacgttttgtcattgacagtcaa
aaaccttttgttataggggaacgcggtaattcactcattcaaatgggatacggcgatccg
gaaggccggcgggtgctcgatctgaaaaaaccactcggcaccataacggccggcggcaat
aaattcgccattgccacaagtcacttgatcaagcttcgcggcacttgcagagacggccaa
acggtgacgaacccaatgcctacgataacggccggcggcctgcacgtcggcgaagtcagg
gcttttttaacgaaatattacggatcggatacgggacaggctctcagtgaccctctgcat
acagtcaccacaaaagacaggttcggtctggtcacgattaaaggcgaaaactatcagatc
gctgacatcggaatgcggatgcttcagcctcatgaattatttgcggctcagggattcccg
actaactacgtgattgatagggatataaacggcgtggcgtattcgaaaaagaaacagatt
gagcgatgcggcaacgcagttccgccgcccttcgctgaacagctggtcagggcaaatctt
cctgaattctgcgtaagtgaacatatgaccaaatttacaaggttaaaggcaaattag
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