Bacillus amyloliquefaciens IT-45: KSO_007665
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Entry
KSO_007665 CDS
T02462
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bami
Bacillus amyloliquefaciens IT-45
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bami03019
]
KSO_007665
03009 Ribosome biogenesis [BR:
bami03009
]
KSO_007665
Enzymes [BR:
bami01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KSO_007665
Messenger RNA biogenesis [BR:
bami03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KSO_007665
Ribosome biogenesis [BR:
bami03009
]
Prokaryotic type
rRNA helicases
KSO_007665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGF27030
LinkDB
All DBs
Position
1457956..1459272
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AA seq
438 aa
AA seq
DB search
MKETKFDGYNLKPFIIDAVHRLGFYEPTDIQKRLIPAVLKNESVIGQSQTGTGKTHAYLL
PILNRIDPGSDTVQAVITAPTRELANQIHQEALKITQGAEDEPIRTKCFIGGTDKQKSID
KLKTQPHLVVGTPGRIADLIKAQALNVYKAQSLVIDEADLMLDMGFLEDVDYIGSRMPEE
LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKRITAEKIEHVLVPSKQRDKDKLLFDMM
SHLNPYLGIVFANTKNTADHIAKYLTEKGMRIGLLHGGLTPRERKKVMKQINDLEFTYVI
ATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQALTIYELSDEDALVRL
EKMGIVFDYAELVNGEWKKGDDRHRRKKRKKSENEADQMAKRLVKKPKKVKPGYKKKMSY
EMEKIKRKQRRNKSNKGK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaactaaatttgatggatacaacttaaaaccgtttattatagatgcagttcac
cgccttggtttttatgaaccgacagatattcaaaagcggctgatacccgccgtgctgaaa
aacgaaagcgtgatcgggcagtcccagacggggacggggaaaacccacgcctatttattg
ccaattttgaatcggattgatccgggttctgatacggtgcaggctgttatcacggcgccg
acgagagagcttgccaatcagattcatcaggaagcgctcaaaatcacacagggtgcggaa
gatgagccgatccggacaaaatgtttcatcggagggacggacaagcaaaaatcaattgat
aagctgaaaacacagcctcatctcgtcgtcggaacgccgggccggatcgcggatctgatt
aaggcgcaggcattgaacgtctataaagcgcagtctctcgtcattgacgaagcagatctg
atgcttgacatgggctttttagaagatgttgattatatcggatcgcggatgccggaagaa
cttcagatgcttgtgttctcagctacgattccggaaaagctgaagccgtttttgaaaaag
tatatggaaaatccgaagtacgcgcatgttgagccgaaaagaatcacagccgaaaagatt
gaacatgttttggttccttctaaacagcgtgataaagacaagctgctttttgatatgatg
tctcatctgaacccttatctgggcattgtgtttgccaatacgaaaaacacggctgaccat
attgcgaaatacctgactgaaaagggcatgaggatcggtcttctgcatgggggattaacg
ccgcgtgagcgtaagaaggtaatgaaacagattaatgatctggaattcacttatgtcatt
gcgacagaccttgcggcaagaggaattgacattaaaggcgtaagccacgtcatcaactat
gagcttccggacgatctggatttttatgttcaccgcgtcgggagaaccgcacgcgccggt
tcatcaggccaagcactgaccatttatgagctttctgacgaagatgcgctcgtaagactc
gaaaagatgggtattgtgtttgactatgcggagcttgtaaacggcgaatggaagaaaggc
gatgaccgccatcgccgcaaaaaacgcaaaaaatcggagaatgaggccgaccaaatggcg
aagcgcctcgtgaaaaaaccgaaaaaagtgaagccgggctataaaaagaaaatgagctac
gaaatggaaaagataaaaagaaagcagagaagaaacaaatctaacaaaggaaagtag
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