Bacillus amyloliquefaciens IT-45: KSO_007670
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Entry
KSO_007670 CDS
T02462
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bami
Bacillus amyloliquefaciens IT-45
Pathway
bami03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KSO_007670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bami03400
]
KSO_007670
Enzymes [BR:
bami01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
KSO_007670
DNA repair and recombination proteins [BR:
bami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KSO_007670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
OST3_OST6
Motif
Other DBs
NCBI-ProteinID:
AGF27031
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All DBs
Position
1459283..1460176
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AA seq
297 aa
AA seq
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MLKIGSHVSMSGKHMLLAASKEAVSYGANTFMIYTGAPQNTRRKKIEDLNIEAGRAHMKE
NGIDEIVVHAPYIINIGNTTNPATFELGVDFLRSEIERTAAIGAKQIVLHPGAHVGAGAE
TGIKKIIEGLNEVIVPGQNVQIALETMAGKGSECGRSFEELAEIISGVTHNEHLSVCFDT
CHTHDAGYDVANDFDGVLNEFDKIVGIDRIKVLHVNDSKNIKGARKDRHENIGFGEIGFD
ALQYIVHHEQLADIPKILETPYVGEDKKNKKPPYRFEIEMLKEKQFDQELLEKISAQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaaaataggttcacacgtctcaatgagcggaaaacatatgctccttgccgcaagc
aaggaagctgtttcgtacggggcgaatacatttatgatctatacgggcgctccccaaaac
acgcgccgcaaaaaaattgaagacttgaatatcgaagcgggccgcgcccatatgaaggaa
aacggcatcgatgagattgtcgtgcatgcgccgtacatcattaacatcggaaatacgaca
aatccggcaacgtttgagctgggtgttgattttctgcgttctgaaattgaaagaacggca
gcgatcggcgcgaaacagatcgtgcttcatccgggagcgcatgtcggagccggggctgag
acgggcatcaaaaaaatcattgaaggtttaaacgaagtgattgttcccggtcaaaacgtg
cagattgcgctggagacaatggcgggcaaagggtcagaatgcggaagaagctttgaagag
ctggccgagatcatttcgggggttacgcataatgaacatctatccgtctgctttgacact
tgccacacccatgacgccgggtatgatgtcgccaatgattttgacggtgttcttaacgag
tttgataaaatcgtcggcatcgatcggataaaagtccttcatgtgaatgacagtaaaaat
attaaaggcgcccggaaagaccgccatgaaaatatcgggttcggagagatcggttttgac
gctctgcagtacatcgttcatcacgagcagcttgccgatattccgaaaatcctcgaaaca
ccgtatgtaggcgaagacaagaaaaataagaagccgccgtaccgttttgaaatcgaaatg
ctgaaagaaaagcagtttgatcaggagcttcttgaaaaaatatcagctcaataa
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