Bacillus amyloliquefaciens IT-45: KSO_011100
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Entry
KSO_011100 CDS
T02462
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bami
Bacillus amyloliquefaciens IT-45
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bami03016
]
KSO_011100 (truB)
Enzymes [BR:
bami01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KSO_011100 (truB)
Transfer RNA biogenesis [BR:
bami03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KSO_011100 (truB)
Prokaryotic type
KSO_011100 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DUF2922
Motif
Other DBs
NCBI-ProteinID:
AGF27711
LinkDB
All DBs
Position
complement(2247428..2248357)
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AA seq
309 aa
AA seq
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MVNGVLLLHKPVGMTSHDCVMKIRKLLKTKKVGHTGTLDPEVSGVLPICVGRATKIVEYV
TDKSKTYDAEITLGFSTSTEDQTGETVSVKPVREPLEEADIKAVLDKLKGPQEQVPPMYS
AVKVNGKKLYEYARAGIEVERPKRNITIEDIALTSPVTYNEDTASFRFTVTCSKGTYVRT
LAVTIGEKLGYPAHMSHLIRTASGDFSLDECFTFEELEQQVSDGTVAEHAVPIDRALNHL
PKWVISDTLAKKAENGSVFDIPAEFSAMTADARIAVCTEDGECVAIYMPHPSKKGLLKPA
KVLMQKSEQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggttaacggagttctccttttacataaaccggtcggcatgacttctcacgactgtgta
atgaaaataagaaaactgttaaaaacaaagaaagtcgggcatacgggaacccttgatccg
gaagtgtcaggcgtactgccgatctgtgtcggacgggctacaaagatcgttgagtacgtc
accgacaagtcaaaaacgtacgatgctgagatcactctcggtttctccacatcgaccgaa
gatcagactggagaaacggtcagcgtaaagcctgtcagggagccgctggaagaagcggat
atcaaagccgttttagacaaattgaagggaccgcaggagcaagtgccgccgatgtattcc
gcggtaaaggtcaacgggaaaaagctttatgaatacgccagagcgggtattgaagtggag
cggccgaagcggaatatcacgattgaagatatcgcgctcacttcccctgtcacttataac
gaagacacagcatcattccgctttacagtcacgtgctcaaaaggcacttacgtcagaacg
ttggcggtgacaatcggtgaaaaactcggctatcccgcgcatatgtcgcatctcatccgc
actgcttcgggcgatttcagccttgatgaatgtttcacgtttgaggaacttgaacagcag
gtttcggacggaacggttgcagagcatgccgtgccgatcgatagagcgctcaatcatttg
ccgaaatgggtcataagtgatacattagctaagaaagctgaaaacgggtcagtgtttgac
atcccggcggaattttctgcaatgacagctgacgcccgtatagcggtctgtactgaagac
ggagaatgtgtggccatttatatgccgcatccttcaaaaaaaggactgctgaaaccggct
aaagtgctcatgcaaaaaagcgaacaataa
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