Bacillus amyloliquefaciens IT-45: KSO_011375
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Entry
KSO_011375 CDS
T02462
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bami
Bacillus amyloliquefaciens IT-45
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bami03032
]
KSO_011375
03400 DNA repair and recombination proteins [BR:
bami03400
]
KSO_011375
Enzymes [BR:
bami01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KSO_011375
DNA replication proteins [BR:
bami03032
]
Prokaryotic type
DNA Topoisomerases
KSO_011375
DNA repair and recombination proteins [BR:
bami03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KSO_011375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AGF27766
LinkDB
All DBs
Position
complement(2299204..2301279)
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDIEQNFEPKYITIRGK
GPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDLDLSSDCRVVFNEITKDAIKE
SFKHPRMINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVALRLIIDREK
EINDFKPEEYWTITGSFLKGKETFEAGFFGKNGKKLPLKSEEDVKAVLAQLKGNKYTVDK
VTKKERKRNPALPFTTSTLQQEAARKLNFRAKKTMMIAQQLYEGIDLGKEGTVGLITYMR
TDSTRISNTAVEEASAFIDQAYGKEYLAGKRKPAKKNENAQDAHEAIRPTSVLRKPADLK
AVLGRDQLRLYKLIWERFVASQMAPAVLDTMSVDLSNNGLTFRANGSKVKFAGFMKVYVE
GKDDQLEEKDRMLPDLKEGDTVLSKDIEPEQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQRRGYVGLDNKRFVPTELGQIVLDLIMEFFPEIINVEFTAKMERDLDHVEDGE
TEWVQIIDSFYTDFEKRVKKAEAEMKEVEIEPEYADEDCELCGSRMVYKMGRYGKFMACS
NFPDCRNTKPIVKQIGVKCPKCHEGNIVERKSKKKRVFYGCDRYPECDFVSWDKPIERKC
PKCENMLVEKKLKKGIQVQCVECDYKEEPQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattatctagtcatcgtggaatcgccggcaaaggcgaaaacgattgaacgttat
ttagggaagaaatataaagtcaaagcttcaatgggacatgtccgggatcttccgaaaagt
caaatgggagttgacatcgaacagaactttgaaccgaaatatattacgatccgcggaaaa
ggccctgttttaaaagaattaaaaacagcggcaaagaaagcaaaaaaagtctatctcgcg
gccgaccccgacagagaaggggaagcgattgcatggcatctcgcacacagccttgatctg
gatctcagctctgactgccgggtcgtctttaatgaaataacgaaagacgccattaaagaa
tcatttaaacatccgcgcatgattaacatggatcttgtcgatgcgcagcaggcgcgccgc
atactagacagactcgtcggatacaaaatcagcccgattctttggaaaaaagtaaaaaaa
ggcctcagtgcgggccgtgttcaatccgttgcgctccggctgatcatcgaccgggaaaag
gaaatcaatgactttaaacctgaagagtactggacgattaccggctcatttttaaaggga
aaagagacgtttgaagccggatttttcgggaaaaacggcaaaaagcttcctttaaaaagc
gaagaagacgtaaaagccgtccttgctcagctgaaaggcaataagtatacagttgacaag
gtgacgaaaaaagagcgcaaacgaaatcccgctctgccgtttacaacgtcaactctgcag
caggaggctgccaggaagctgaatttcagagcgaagaaaacgatgatgatcgctcagcaa
ttatatgaaggaattgatctcggcaaagaagggacagtcggactcatcacgtatatgaga
acggactcaacgcggatttccaatacagccgttgaagaggcgtcagcttttattgatcag
gcatacggaaaagagtacttagcgggaaaacggaaaccggcaaagaaaaatgaaaacgct
caagatgcccacgaagcgatccgcccgacttcggtgctcagaaaacctgccgacttaaaa
gcggtgcttggaagagaccagctcagactatacaagctgatttgggagcgttttgttgca
agccagatggcgcctgccgtacttgatacgatgagcgtcgatctcagcaataacggattg
acattccgggcaaacggaagtaaagtcaaattcgccggcttcatgaaagtctatgtagag
ggtaaagacgatcagctggaagaaaaagaccgcatgcttccggaccttaaagagggagac
acggttttatcaaaagatattgagcctgagcagcactttactcagccgcctccgcgttac
acagaggcgcgcctggttaaaacgcttgaagaactggggatcggccgtccttcgacatat
gcgccgactcttgacaccatccagcgccgcggttacgtgggattagacaataaacggttt
gtgccgactgagcttgggcagatcgttctggatcttatcatggagtttttcccggaaatc
atcaacgttgaattcacggctaaaatggaaagggaccttgaccatgttgaagatggcgag
acagaatgggttcaaatcattgacagcttctataccgatttcgaaaaacgcgtgaaaaaa
gcggaagctgaaatgaaagaagtggaaattgaacctgaatacgcagatgaagattgtgaa
ttatgcggctcccggatggtttataaaatgggccgatacggtaaatttatggcgtgttcc
aacttccctgactgccggaatacaaaaccgattgttaaacaaatcggcgtaaaatgtcct
aagtgccatgaaggaaatattgtcgaacgaaaatcaaaaaagaaacgcgtcttttacggc
tgtgaccgttatcctgaatgcgacttcgtatcttgggacaaaccgattgaacgaaaatgc
ccgaaatgtgaaaatatgctcgtagagaaaaagcttaaaaaaggcatacaagtccaatgc
gtcgaatgcgattataaggaagaaccacagaagtag
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