Bacillus amyloliquefaciens IT-45: KSO_011475
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Entry
KSO_011475 CDS
T02462
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bami
Bacillus amyloliquefaciens IT-45
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KSO_011475 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bami03019
]
KSO_011475 (rnc)
03009 Ribosome biogenesis [BR:
bami03009
]
KSO_011475 (rnc)
03036 Chromosome and associated proteins [BR:
bami03036
]
KSO_011475 (rnc)
Enzymes [BR:
bami01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
KSO_011475 (rnc)
Messenger RNA biogenesis [BR:
bami03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KSO_011475 (rnc)
Ribosome biogenesis [BR:
bami03009
]
Eukaryotic type
90S particles
RNase
KSO_011475 (rnc)
Prokaryotic type
rRNA processing factors
KSO_011475 (rnc)
Chromosome and associated proteins [BR:
bami03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
KSO_011475 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Phage_P2_GpU
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AGF27786
LinkDB
All DBs
Position
complement(2318695..2319444)
Genome browser
AA seq
249 aa
AA seq
DB search
MSKHSHFKDKKKFYKKIEQFKEFQERISVHFQNEKLLYQAFTHSSYVNEHRKKPYEDNER
LEFLGDAVLELTISQFLFAKYPAMSEGDLTKLRAAIVCEPSLVSLAHELSFGDLVLLGKG
EEMTGGRKRPALLADVFEAFIGALYLDQGLEPVQQFLKEYVFPKINDGAFSHVMDFKSQL
QEFVQRDGKGSLEYKILNEKGPAHNREFEALVSLKGEALGIGNGRSKKEAEQHAAQEALA
KLQKHHTKQ
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacactcacattttaaagataaaaaaaagttctataaaaaaatagagcaattt
aaagagttccaagaacggatttcggttcattttcaaaacgagaaacttttgtatcaagca
tttacacattcatcttatgtgaatgagcatcggaaaaagccgtatgaagacaacgaaagg
cttgaatttttaggtgacgctgttttggaactgacgatctcccaattcttatttgccaaa
tatccggccatgagtgaaggagatttgacgaagctgagagccgctatcgtatgcgagccg
tcactcgtctcacttgcccacgaattgtcattcggcgatcttgttctcttgggaaaagga
gaagaaatgacgggcggcagaaagcgtcctgcgcttttagcggatgtgtttgaagcgttt
atcggcgcactgtatctggatcagggccttgagccggttcagcaattcctgaaagagtac
gtgttccctaaaataaacgatggtgctttttctcatgtgatggatttcaaaagccagctt
caagaatttgtacagcgggacggaaaaggatcgcttgagtacaaaattctcaatgaaaaa
gggcctgcccacaaccgggaattcgaggcgctcgtctctcttaaaggtgaggcgctcggt
atcgggaacggacgttccaaaaaagaagccgagcagcatgcggcacaggaagctcttgca
aaattgcaaaaacatcatacgaaacaataa
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