Bacillus amyloliquefaciens IT-45: KSO_011585
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Entry
KSO_011585 CDS
T02462
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bami
Bacillus amyloliquefaciens IT-45
Pathway
bami03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KSO_011585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bami03400
]
KSO_011585
Enzymes [BR:
bami01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KSO_011585
DNA repair and recombination proteins [BR:
bami03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSO_011585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PIF1
Zn_ribbon_6
T2SSE
Cas3-like_C_2
AAA_19
Cas12f1-like_TNB
AAA_30
TrwB_AAD_bind
TSP1_2
Zn_ribbon_ISL3
HypA
nSTAND3
UvrD-helicase
IBR_1
Motif
Other DBs
NCBI-ProteinID:
AGF27808
LinkDB
All DBs
Position
complement(2338646..2341057)
Genome browser
AA seq
803 aa
AA seq
DB search
MNVAEVIVDVSSKNIDRPFDYKIPDHLKGMIEVGMRVIVPFGPRKLQGFVTGLKDSSELN
GGSMKEVEKLLDLTPVLTEELMQLSSWLSDKTLSFKITALQAMLPAALKAKYEKELKVVD
EEALTPDIKQLFRNQKSLLYSDITDESILSSLQKFVRKGSIDVTYKVAQKTNKKMIRMIE
AGADKEELARHADSLTKQASKQLAVLTYFIGGGEKISAAELCKKTDSSSATLKTLLKKGL
LTESFEEVYRDPYQDRMFKKTEPLSLTEEQQAAFEPIKQAVADHVHHVFLLHGVTGSGKT
EIYLQSIEKVLAKGQEAIVLVPEISLTPQMVNRFKGRFGSQVAVMHSGLSTGEKYDEWRK
IQRKEVRLVVGARSAIFAPFENLGMIIIDEEHESSYKQEEMPRYHAKDVAIRRAEHHSCP
VVLGSATPTLESFARAKKGVYELLPLKHRVNRQLMPDVSLVDMREELRNGNRSMFSRELM
EQLEEKLAKKEQAVLFLNKRGYSSFVMCRDCGYVPQCPHCDISMTYHRYGQRLKCHYCGH
EEPVPGTCPECGSEHIRFFGTGTQRVEEELTKVLPQARVIRMDVDTTSRKGAHEKLLSAF
GEGKADILLGTQMIAKGLDFPNVTLVGVLSADTTLHIPDFRAAEKTFQLLTQVSGRAGRH
EKPGTVVIQTYTPSHYSIQLTKTHDYETFFQQEMAHRRAQSYPPYYYVALVTVSHEEAAK
AAVTAEKITNYLRAGCGPDTKILGPAASPIARIKDRYRYQCVIKYRQENELQIQLKKILE
HYKRDIAQKHVMISIDMNPYMLM
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagcagaagtcattgtcgatgtcagctccaaaaacattgacagaccctttgat
tacaaaattcccgatcatttaaaagggatgatcgaagtcggcatgcgggtgattgtcccg
tttggcccgcgcaagcttcaaggatttgtgaccggtttgaaagattcgtccgaattaaac
ggcggctcaatgaaggaagtcgagaagcttcttgatttgacgcctgttctgactgaggaa
ctgatgcagctgtcttcatggctttctgacaaaacgctgtcgtttaaaatcacggcgctt
caggcaatgctgcccgccgcattgaaggcgaagtacgagaaagagctgaaagtcgttgac
gaagaagcgctgacaccggacatcaaacagcttttcaggaatcaaaaaagtcttctgtac
tcggatattaccgatgaaagcattctttcgtcacttcagaaattcgtgcgtaaaggaagc
attgatgtcacatataaagtcgcccaaaaaacgaataaaaaaatgatccgcatgatcgaa
gcgggggcagacaaagaagaactcgcccggcacgcagattcattgacaaagcaggcttct
aaacagctcgccgtgcttacttattttatcggcgggggagaaaagatttccgcggctgaa
ctttgcaaaaagaccgattccagttccgcgacgctgaaaacgcttcttaaaaaggggctt
cttacggaaagctttgaggaggtttaccgtgatccttatcaggacagaatgttcaaaaaa
acagagccgctctctcttacagaagagcagcaggccgcttttgagccgattaaacaagct
gtagccgaccatgtccatcacgtctttctgcttcacggcgtcacgggaagcggcaaaacg
gaaatttacctgcaatccattgaaaaagtgctggcaaaaggacaagaagccatcgtgctc
gttccggaaatctcgttgacaccgcaaatggtcaaccgttttaaaggccgcttcggctca
caggttgcggtcatgcacagcggattatccacaggtgaaaaatacgatgaatggcggaag
attcagcgcaaggaagtccggcttgtcgtcggagccagatcggccatctttgccccgttt
gaaaatctcggcatgatcattattgatgaagagcacgaatcttcctataagcaggaggaa
atgccgcggtatcatgcaaaggacgtagccatccgccgggccgagcatcacagctgtccg
gtcgtcctcgggagcgccacgccgacattggagtcatttgcgcgggcgaaaaaaggcgtt
tatgagctgcttccgttaaaacatcgcgtaaaccgccagctcatgcctgacgtttctctc
gttgatatgagagaagaactgagaaacggcaacagatcaatgttctcaagagagctgatg
gaacagctggaagagaagcttgcaaaaaaagagcaggccgtcctttttctgaataaacgg
gggtattcctcgtttgtgatgtgccgggattgcggttatgtgccgcaatgtccgcattgc
gacatttccatgacttatcaccgctacggacaaaggctgaaatgccattactgcggccat
gaggaacctgtcccgggaacatgcccggaatgcggcagcgaacatatccgctttttcggc
acgggaacgcagcgtgtggaggaggagcttaccaaagtgctgcctcaggcgcgtgtgatc
aggatggatgtggacaccacttcaagaaaaggcgcccatgaaaaactgttgtcagcgttc
ggtgaagggaaggcggatatcctgctcggtacgcagatgatcgcgaaagggcttgatttt
ccgaacgtgacgctcgtcggagtattgagcgcagatacgacgcttcacatcccagatttc
agggccgcggagaagacattccagctgctgacgcaggtaagcggacgggccgggcggcat
gaaaagccgggaacggtggtcattcaaacgtatacaccgtctcattacagcattcagctg
acgaaaacgcacgactatgaaactttttttcagcaggaaatggcgcacagacgggcccag
tcatacccgccgtattattacgtggcgctggtgaccgtttctcatgaagaagcggcaaaa
gccgcggtcaccgcagaaaagattacaaactatttaagagcgggatgcgggcctgatacg
aaaattctcgggccggcggcttccccgattgccaggatcaaagatagatatcgctatcaa
tgcgtgataaaatacagacaggaaaacgagttgcagattcagttgaaaaagatactggag
cactataaacgcgacattgcgcaaaagcatgtaatgatttcaattgatatgaatccgtac
atgctgatgtaa
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