Bacillus amyloliquefaciens IT-45: KSO_013215
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Entry
KSO_013215 CDS
T02462
Name
(GenBank) positive control sigma-like factor
KO
K24072
positive control factor
Organism
bami
Bacillus amyloliquefaciens IT-45
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bami03021
]
KSO_013215
Transcription machinery [BR:
bami03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KSO_013215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_38
HTH_23
GerE
PhyR_sigma-like
UPF0122
HTH_36
HTH_29
Fe_dep_repress
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AGF28132
LinkDB
All DBs
Position
complement(2691322..2691834)
Genome browser
AA seq
170 aa
AA seq
DB search
MEDLLFEYKRTLKETKKWYKQLEEADETVLTSEELKDKKIIRTIITDLEYVIEWLEKGRQ
PGIRRAIDRRDAYQRMLIKDPRIIETYSQALMFEPSANVTEEDRIRLRDALAVLTDREKE
MLLLHKAECFSYERIAALLNVKKSTVQTTVKRALLKIQKQQEQRNQSPAS
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggaagacttactatttgaatataaacgcacgctgaaagagacgaaaaagtggtacaag
cagctggaggaagccgatgaaacggtgcttacttcagaagaactgaaagataaaaaaatc
atcagaacgattattacagatttggaatatgtcatcgaatggcttgaaaaaggccggcag
cccggcataagaagagcgatagaccgcagagacgcttatcagagaatgctcattaaagat
ccgagaatcatagaaacctattcgcaggcgctgatgtttgaaccgtccgcaaatgtgact
gaagaagacagaatcagactgcgggacgcattagccgttttaacggatagagaaaaagaa
atgctgctgctccacaaagcggaatgcttttcgtatgaacggatcgccgccttgctgaat
gtaaagaaatcaaccgtacaaacgacggtcaaacgggcgcttctgaaaattcaaaaacag
caggaacaaagaaatcaatcgcctgcttcataa
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integrated database retrieval system
