Bacillus amyloliquefaciens IT-45: KSO_013725
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Entry
KSO_013725 CDS
T02462
Name
(GenBank) positive control sigma-like factor
KO
K24072
positive control factor
Organism
bami
Bacillus amyloliquefaciens IT-45
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bami03021
]
KSO_013725
Transcription machinery [BR:
bami03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KSO_013725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
UPF0122
HTH_38
HTH_23
HTH_17
HTH_68
HTH_Tnp_ISL3
DUF134
Sigma70_ECF
HTH_40
MarR_2
Phage_antitermQ
HTH_Crp_2
HTH_36
HTH_24
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AGF28234
LinkDB
All DBs
Position
complement(2784795..2785310)
Genome browser
AA seq
171 aa
AA seq
DB search
MQDLIIEYKRALRETRKMYRLYKDTAEVNLTAEQINDKKIISSMISDIEFTLEWLQNGRQ
PGARRGADRRDAYQRTILADPRLIDALPEEYAIVQEAEGEVSDWDKERIADALSVLTERE
KDIFMMHAVQNMSFEEIAQLLGIKKGTVQKNIERSRLKMKNRADHSLFCLA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatttaatcattgaatacaaacgagctttaagagaaacaagaaaaatgtaccgg
ctctacaaagatacagctgaggtcaatctgacggctgaacagattaacgacaaaaagatt
atcagtagcatgatcagcgatatagaattcactctcgaatggctgcagaacggaagacag
cccggcgcccgccgaggtgctgacagaagagacgcataccaaaggacgattcttgctgat
ccgcgcttaattgatgcgctcccggaagaatacgcaatcgttcaagaggctgagggagag
gtaagtgattgggataaggaaagaatcgctgatgccctatccgtgcttactgaaagagaa
aaagacattttcatgatgcatgctgtgcaaaacatgtcattcgaagaaatcgcgcagtta
ttggggattaaaaaaggaactgtgcagaagaacatcgagcgttcccgcctgaaaatgaaa
aatagagcagatcacagcctattctgtttagcgtga
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integrated database retrieval system
