Bacillus amyloliquefaciens IT-45: KSO_017165
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Entry
KSO_017165 CDS
T02462
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
bami
Bacillus amyloliquefaciens IT-45
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bami03021
]
KSO_017165
Transcription machinery [BR:
bami03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KSO_017165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
GerE
PhyR_sigma-like
KORA
DUF134
IF2_N
HNF-1_N
Phage_rep_O
DUF1492
Spectrin_7
Motif
Other DBs
NCBI-ProteinID:
AGF28916
LinkDB
All DBs
Position
complement(3455747..3456535)
Genome browser
AA seq
262 aa
AA seq
DB search
MAQPSKTTKLTKDEVDRLIRDFQTHDNKEAQETLVEVYTNLVEMLAKKYSKGKSFHEDLR
QVGMIGLLGAIKRYDPEVGKSFEAFAIPTIIGEIKRFLRDKTWSVHVPRRIKELGPRIKM
AVDQLTTETQRSPKVEEIAAFLDVSEEEVLETMEMGKSYQALSVDHSIEADADGSTVTIL
DIVGSQEEGYERVNQQMMIKSVLHVLSDREKQIIDLTFVQNKSQKETGDILGISQMHVSR
LQRKAVKKLREALIGDPSMELM
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaccatcaaaaactacgaaactaactaaagatgaagttgatcggctcatacgc
gactttcaaacacatgataataaagaagcccaggaaacactcgtcgaggtgtataccaat
ctcgtcgaaatgctggcaaagaaatattcaaaaggaaaaagctttcacgaagatctccgc
caagtcgggatgatcggacttctcggagccattaaacggtatgatcccgaggtcggcaaa
tcctttgaagcatttgcgattccgaccatcatcggcgagatcaaacgcttcctcagagat
aaaacatggagcgtacacgtcccgagacggattaaagaactcgggccgcgcattaaaatg
gcggtggatcagctgacgacagagacgcagcggtcgccgaaagtcgaagaaatcgcagcc
tttctcgatgtgtcagaagaggaagtgcttgaaacgatggagatgggaaaaagctatcag
gcgctttctgtcgatcacagcatcgaagcggatgcggacggaagcaccgtcacgatttta
gatatcgtcgggtcgcaggaggaaggatacgaacgcgtcaaccagcagatgatgatcaaa
agcgtgcttcatgtgctgtccgaccgcgaaaaacagattatcgatctaacatttgtgcaa
aataaaagccaaaaagaaacaggggacattctcggaatatctcaaatgcacgtctcgcgc
ctgcagcggaaagcggtgaaaaaactgagagaggccttgattggagatccctccatggag
ctaatgtaa
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integrated database retrieval system
