Bacillus amyloliquefaciens IT-45: KSO_019310
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Entry
KSO_019310 CDS
T02462
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bami
Bacillus amyloliquefaciens IT-45
Pathway
bami03030
DNA replication
bami03430
Mismatch repair
bami03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSO_019310
03430 Mismatch repair
KSO_019310
03440 Homologous recombination
KSO_019310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bami03032
]
KSO_019310
03400 DNA repair and recombination proteins [BR:
bami03400
]
KSO_019310
Enzymes [BR:
bami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSO_019310
DNA replication proteins [BR:
bami03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KSO_019310
DNA repair and recombination proteins [BR:
bami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KSO_019310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
TIP49
AAA_assoc_2
AAA_5
AAA_22
AAA_lid_RFC1
AAA_16
AAA_19
DnaX_C
RCF1-5-like_lid
DNA_pol3_delta_C
Rad17
PIF1
AAA_28
Mg_chelatase
AAA_7
DUF815
AAA_14
TsaE
Motif
Other DBs
NCBI-ProteinID:
AGF29341
LinkDB
All DBs
Position
complement(3899137..3900828)
Genome browser
AA seq
563 aa
AA seq
DB search
MGYQALYRVFRPQQFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAK
AVNCEHAPVEEPCNECAACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTY
KVYIIDEVHMLSIGAFNALLKTLEEPPAHCIFILATTEPHKIPLTIISRCQRFDFKRITS
KAIVGRMKTIVDAEQLKVEEGALDIIASAADGGMRDALSLLDQAVSFSGEELSVDDALLI
TGAVSQHYIGKLASALHRKQVSEALETLNELLQQGKDAAKLIEDMIFYFRDMLLYQAAPG
LEGVLEKVKVDETFRNLSGDIPAPALYEMIDILNKSHQEMKWTNHPRIFFEVAVVKICQT
AQQSAGDIPEVGMLMNKIQQLEQEVERLKTSGVKVQMESAPKEAPRPQKGGKSHYKAPVG
RIHEILKEATRPDLEQLKSSWGKLLAHLKQQNKVSHAALLNDSEPVAAAQKAFVLKFKYE
IHCKMVAEDNNGVRTNLEQILESMLGKRMDLIGVPEAQWGKIREEFLNDHQQESEGSNEP
AEEDPLIAEAKKLVGADLIEIKD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtgggttaccaagctttatatcgagtatttaggcctcagcagtttgaagatgtggtcgga
caggaacacattacgaaaacgctgcaaaatgcccttttgcaaaagaaattttctcatgca
tatctgttttctggaccgcggggaacgggaaaaaccagtgcagctaaaatatttgcgaaa
gcagtcaactgtgagcacgcccctgtagaagaaccgtgcaatgagtgcgcggcgtgcaag
gggatcacaaatggctctatatcagatgtgattgaaatagatgcggcgtcgaataacggc
gtagacgaaatccgcgacatccgtgacaaagtaaaatttgccccgtcggccgttacttac
aaggtatatattatagatgaggtgcatatgctctctatcggcgcattcaatgcgcttctg
aaaacgctggaagaaccgccggcacattgcattttcatattagctacgactgagcctcat
aagattcctttaaccattatctccagatgtcagcgttttgacttcaaacggattacatcc
aaagcaattgtcggacgaatgaagacaatcgtcgatgcagagcagctgaaggtggaagaa
ggagcccttgatatcatagcgagtgctgcggacggaggaatgagggacgcgctgagcctg
ctcgatcaagctgtatcattcagcggcgaggagctgtcggtggatgacgctttgctcatt
accggagccgtttctcagcactatattggaaaactggcatctgctcttcaccgcaaacag
gtttccgaggcattggaaacactgaatgaattgctccagcaggggaaagatgcggccaaa
ctgattgaagatatgattttctatttcagggatatgctcttgtaccaggccgctcccggt
ttagaaggagtcctggagaaggtgaaggtcgatgaaacgtttcggaatctgagcggtgac
ataccggcccccgctttatatgagatgattgatatcctgaataaaagccatcaggaaatg
aagtggacgaaccacccaagaatcttttttgaagtggctgtcgtgaaaatatgccagacg
gcacagcaatccgccggagacatccctgaggtcggcatgctgatgaataagatccagcag
cttgagcaggaagtagaaaggctgaaaacctccggtgtgaaggttcagatggaaagcgct
ccgaaagaagctccgcgtcctcaaaaaggcggaaaaagtcattataaagccccggtcgga
agaattcatgagatattgaaggaagccacaagacctgatcttgaacagcttaaaagcagc
tggggcaagctgctggcacacctgaaacagcagaataaggtgtctcatgcggctcttttg
aatgacagtgaaccggtggccgctgctcaaaaggcatttgtgcttaaatttaaatacgaa
atccattgtaaaatggttgcagaagataataacggagtccgtacgaatcttgaacagatt
ctcgaatcaatgctcgggaaaagaatggatttgattggcgttccggaagcacaatggggt
aaaataagagaagaatttttaaatgatcaccagcaggaaagtgaaggatcaaacgaaccg
gctgaagaagatccgctgattgcagaggcgaaaaaacttgtcggagcggatttaatcgaa
ataaaagactaa
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