Bacillus velezensis UCMB5036: BAM5036_2306
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Entry
BAM5036_2306 CDS
T02480
Symbol
holA
Name
(GenBank) DNA polymerase delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
baml
Bacillus velezensis UCMB5036
Pathway
baml03030
DNA replication
baml03430
Mismatch repair
baml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAM5036_2306 (holA)
03430 Mismatch repair
BAM5036_2306 (holA)
03440 Homologous recombination
BAM5036_2306 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baml03032
]
BAM5036_2306 (holA)
03400 DNA repair and recombination proteins [BR:
baml03400
]
BAM5036_2306 (holA)
Enzymes [BR:
baml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BAM5036_2306 (holA)
DNA replication proteins [BR:
baml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BAM5036_2306 (holA)
DNA repair and recombination proteins [BR:
baml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BAM5036_2306 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
DUF4704
Hib_C
V-ATPase_G_2
Motif
Other DBs
NCBI-ProteinID:
CCP22342
LinkDB
All DBs
Position
complement(2495483..2496505)
Genome browser
AA seq
340 aa
AA seq
DB search
MVFDVWKALKKGDVRSVYCLYGKETYLLQETVSRIRQAVVDEETKDFNLSVFDLEEDPLD
QAVTDAETFPFMGEKRLVIVKNPSFLTGEKKKEKIEHNTAALETYLKEPAPYTVFVIVAP
YEKLDERKKLTKALKQKALMIEAKELNAKETTDFTINLAKSENKMIDTEAAEHLVLLANG
HLSSIYQEIQKLSAYTGDRHEITLEDVRELVARSLEQNIFELINKIVNRKRTESLQIFYD
LLKQNEEPIKIMALIANQFRLIMQTKYFAGQGYGQKQIASNLKVHPFRVKLAMDQARLFS
EEELRRIIERLAVMDYEMKTGKKDKQLLLELFLLELLRTE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggtatttgatgtttggaaagccctgaaaaaaggggatgtccgctccgtttattgctta
tacggaaaagaaacgtatctgctccaagaaactgtcagccggatcagacaagctgtcgtt
gatgaggagacaaaggattttaacctgtctgtttttgatcttgaagaggatccgcttgac
caggccgtaaccgatgcggaaacgtttccgtttatgggagagaagcggctggtcatcgta
aaaaatccgtcttttttaacaggggaaaaaaagaaagaaaaaatagagcataatacagcc
gctctggagacttatctgaaggagcctgcgccttacacggtctttgtgattgtggctccg
tacgagaaactggacgaacggaaaaagctgacgaaagcgctgaagcaaaaagcccttatg
attgaagctaaggagctgaatgcaaaggagacgactgattttacgattaatctggcgaaa
tccgaaaataaaatgatcgatacagaagctgccgagcatttggttctgcttgcaaacggc
catctgtcttccatatatcaggaaatacaaaaactctccgcctacaccggtgacagacat
gagatcacacttgaagatgtccgtgagctcgtcgcaagaagtttggagcagaatattttt
gagctgatcaacaaaatcgtgaaccgaaaacggacggaaagtcttcaaatattttatgat
cttttaaaacaaaacgaagaaccgatcaaaattatggcgctgatcgccaaccaattccgt
ctgattatgcagacaaagtattttgcaggacaaggatacggccaaaagcaaatcgcttcc
aacttaaaggtgcaccccttccgggtaaaactggcgatggatcaggcgaggcttttttcc
gaagaagagctgcggcgtattatagaaagactcgcagtgatggattatgaaatgaaaacg
gggaaaaaggacaagcagctcttgctggagctctttctccttgagcttctccggactgaa
tga
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