Bacillus velezensis UCMB5036: BAM5036_2949
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Entry
BAM5036_2949 CDS
T02480
Symbol
sigO
Name
(GenBank) alternative sigma factor
KO
K26992
RNA polymerase sigma-O factor
Organism
baml
Bacillus velezensis UCMB5036
Brite
KEGG Orthology (KO) [BR:
baml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baml03021
]
BAM5036_2949 (sigO)
Transcription machinery [BR:
baml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAM5036_2949 (sigO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
UPF0122
MarR_2
Sigma70_ECF
GerE
PoNi_C
KORA
DUF3597
HTH_3
Motif
Other DBs
NCBI-ProteinID:
CCP22965
LinkDB
All DBs
Position
complement(3129747..3130325)
Genome browser
AA seq
192 aa
AA seq
DB search
MDYQVLLRSKCKEIMKHPIVKHFLSDPKHYEKFKNVLEHSDEKDAKSLDDHFKQFYKEIR
IIKYMNSMIRIFSIDFDKRIRKNQKRYPLTVDQPEGGEALPYEMGKDAYEEFLRKQGDLS
QHVQNRDLYEALQTLTDKQKSVLTNIYLHGATMKEIAESLGESRQNISNIHKKGLDNLRK
QLDKQKKGENKQ
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggactatcaagttcttttacggtcaaaatgcaaggaaattatgaaacatccgatcgtt
aaacattttttaagtgacccaaagcattacgagaaatttaaaaatgtgctggaacattca
gacgagaaggatgcaaaatcactggacgaccattttaaacagttttataaggaaatccgg
atcatcaaatatatgaactctatgatccggattttctccatcgattttgacaagcgcatc
cgtaaaaatcagaagcgctatccgctgacggtggatcagccggagggaggtgaagcgctt
ccctatgaaatgggaaaagatgcgtatgaagagtttctgcggaagcagggggatttgagc
cagcatgtccaaaaccgtgatttatacgaagcgcttcagacgttaaccgataaacaaaaa
agcgtgctgacgaatatttatcttcacggagcgacgatgaaggagattgccgagtcgctg
ggtgaatcacggcagaacatttccaatattcataaaaaagggctcgacaatctcagaaag
cagctggacaagcaaaaaaagggggaaaataagcagtga
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integrated database retrieval system
