Bacillus velezensis UCMB5036: BAM5036_3145
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Entry
BAM5036_3145 CDS
T02480
Symbol
uvrB
Name
(GenBank) excinuclease ABC (subunit B)
KO
K03702
excinuclease ABC subunit B
Organism
baml
Bacillus velezensis UCMB5036
Pathway
baml03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
baml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BAM5036_3145 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baml03400
]
BAM5036_3145 (uvrB)
DNA repair and recombination proteins [BR:
baml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAM5036_3145 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BAM5036_3145 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
DUF87
AAA_30
AAA_7
AAA
AAA_22
CDT1
AAA_16
AAA_19
AAA_25
P-loop_SecA
AAA_5
TrwB_AAD_bind
UFL1
HEM4
UB2H
AAA_6
EAD4
Motif
Other DBs
NCBI-ProteinID:
CCP23160
LinkDB
All DBs
Position
complement(3326944..3328929)
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AA seq
661 aa
AA seq
DB search
MKDRFELVSKYQPQGDQPQAIEKLVKGIQEGRKHQTLLGATGTGKTFTVSNLIKEVNKPT
LVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEID
KLRHSATSSLFERRDVIIIASVSCIYGLGSPEEYREMVVSLRPEMEIERNELLRKLVDIQ
YARNDIDFQRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVDALTGEILGDRDH
VAIFPASHFVTRAEKMEKAILNIEQELEERLKVMHENGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPPGSTPYTLLDYFPDDFMIVVDESHVTIPQVRGMFNGDQARKQV
LVDHGFRLPSALDNRPLRFEEFEKHMHNIVYVSATPGPYEIEHTPEMIEQIIRPTGLLDP
LIDVRPIEGQIDDLIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEIK
TLERIEIIRDLRLGKHDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNAEGRVIMYADKITNSMEIAINETKRRREQQERFNEIHGITPQTINKEIRDVIRATQ
AAEDKEEYKTKAAPKLAKMTKKERQKVVEQMEHEMKEAARALDFERAAELRDLLLELKAE
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatcgttttgagttagtctcgaaatatcagccccagggagatcagccgcaagcg
attgagaagcttgtcaaaggcatacaggaaggcagaaaacaccagactctcctgggtgcg
acagggacgggcaaaacctttaccgtgtccaatctgattaaagaagtgaataaaccgaca
ctggtcattgcccataacaaaacccttgccggacagctgtacagcgagtttaaggagttt
ttcccgaacaatgctgtcgaatattttgtcagctattacgattactatcagccggaggca
tacgtgcctcaaacggatacttttatagagaaagacgcaagcattaatgatgaaattgat
aaactgagacactccgcgacatcctctctgtttgaacggagagatgtcattattattgcg
agtgtgtcatgcatatacggtctcggttcgcctgaagaataccgggaaatggtcgtgtcg
ctcagaccggaaatggagattgagcggaacgagctgctgagaaagcttgtagatatccag
tatgcccgcaatgatatcgactttcagcgcgggacgttccgcgtgcgcggagacgttgtg
gaaatattcccggcttcccgtgacgaacattgtatcagagtggaatttttcggagatgaa
attgagcggatcagagaggtcgacgctttgaccggagaaattctcggcgaccgtgaccat
gtcgcgatttttccggcttcccacttcgtcacccgggcggaaaagatggaaaaagcgatt
ctgaatattgaacaggagcttgaggagcgcttgaaagtcatgcacgaaaacggcaagctc
cttgaagcgcagcggcttgagcagcggacgagatatgatcttgaaatgatgcgggaaatg
ggtttttgctcagggatcgagaactattcaagacatttgacactccgtccgccgggctct
acgccgtatacgctgcttgattattttccggacgattttatgattgtcgttgatgaatca
catgtgacgattccgcaggtgcgcggcatgttcaacggtgaccaggcgagaaaacaggtg
cttgtcgatcacgggttccgcctgccgtcagcgcttgacaaccgtccgctccgattcgag
gaatttgagaaacacatgcacaatatcgtgtacgtgtcggcgactccgggaccgtatgaa
attgagcatacgccggaaatgatcgagcagatcatcagaccgacgggactcctcgatccc
ctcattgacgtccgtccgatcgaaggacagattgatgatctgatcggcgagattcaggcg
aggatagaacggaatgaacgcgttctcgtgacgactttaacgaaaaaaatgtcagaggat
ctgaccgattatctcaaggaaatcggcatcaaggtcaattatctgcattccgagattaag
acgcttgaacggattgaaatcatccgtgacctccgcctcggaaaacatgatgtgttaatc
ggcatcaacctgctgagggaagggcttgatattccggaagtgtcacttgtcgccattctc
gatgcggataaagaaggcttcctccgttctgaacgttcgctgattcagacgatcggacgg
gcggcacgaaacgcggaaggccgcgtcatcatgtatgccgataaaatcacaaattcgatg
gaaatcgcgattaatgaaacgaagcgccgccgggaacagcaggagcgctttaacgaaatt
cacggcattacgccgcaaacgatcaataaggaaatccgcgatgtgatccgcgcgacgcag
gccgctgaggataaagaagaatataaaacaaaagccgcgcctaaactggcgaagatgacg
aagaaagaacgccagaaagtcgttgagcaaatggagcacgaaatgaaagaagcggccaga
gcgcttgatttcgagcgggcggcagagcttcgtgatttactgttagagcttaaagcggaa
ggatga
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