Bacillus velezensis UCMB5113: BASU_0973
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Entry
BASU_0973 CDS
T02796
Symbol
pbpF
Name
(GenBank) penicillin-binding protein 2C required for spore germination
KO
K12555
penicillin-binding protein 2A [EC:
2.4.99.28
3.4.16.4
]
Organism
bamn
Bacillus velezensis UCMB5113
Pathway
bamn00550
Peptidoglycan biosynthesis
bamn01100
Metabolic pathways
bamn01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
bamn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BASU_0973 (pbpF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BASU_0973 (pbpF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bamn01003
]
BASU_0973 (pbpF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bamn01011
]
BASU_0973 (pbpF)
Enzymes [BR:
bamn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
BASU_0973 (pbpF)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BASU_0973 (pbpF)
Glycosyltransferases [BR:
bamn01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
BASU_0973 (pbpF)
Peptidoglycan biosynthesis and degradation proteins [BR:
bamn01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
BASU_0973 (pbpF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
CDG25272
LinkDB
All DBs
Position
997526..999667
Genome browser
AA seq
713 aa
AA seq
DB search
MLKKKKRFFIPAVIAAATAFLALIGYIIIIFLGHYVIDEKKLILHASSKIVDQNGDEIAS
LYTENREPVSIQQVPEDVRDAFIAVEDKRFYEHHGIDVKSVGRAVFRDVLAGGKVEGGST
ITQQLAKNIFLTHDKTFLRKTKEVIIAINLERDYSKDKLLEMYLNQLYFGHGVYGIQAAS
HYYFNKEVKDLTVAEGAVLAAIPKAPSLYSPIQHPDKNKERRDTILAMMNDQGYISAKEA
VRAQGRTLGLNVKKTSETPWFDSYIDLVIKEAESRYSMSGEQLLQGGYTIRTSLDSKLQK
TAYTLMKESGYFPGTDQAAEGSAVFIDNKTGGVRAAVGGRDYVTKGYNRVTAKRQPGSTF
KPIAVYGPAMQEDKFKPYSLLQDKLTSYDGYEPKNYDGQYKGEVTMQDAITYSINAPAVW
TLKQIGVDTGKSYLEKNGMNISDNGLAIALGGLSEGVTPLQLAGAYHTFAANGMYTKPFF
IENITDEDGETLSGPKNGKTRVFSGQTAWNMTRMLQQVVKEGTASQGSYQGDLAGKTGTT
TFPGVPGATKDAWFAGYTPGLTGAVWMGYDKTDKTHYLKGGSQYPVRLFKDIVTKAGENG
RTFKKPENVKELGSPIELEAVKSLSARYTFKAMGLITVQLKWDIQKDDRVVYRIYEKKDG
KDKLLDSVKGKGSFDIPYANLFSGASYKVVPYNSQTDQEGEGTEYVQPKLFSS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaagaaaaaaagattctttattccggctgtaattgcggcggcaaccgctttt
ctcgcgttaatcggatacattatcattatatttctcggccattatgtcatcgatgaaaag
aaattaatactgcacgcatcttcaaaaatcgtcgatcaaaacggtgatgaaatcgcgagc
ctctatacggaaaatcgcgagccggtatccattcagcaggttccggaagatgtgagagat
gcctttatcgccgttgaagataaacggttttacgaacatcacggcattgatgtgaagtct
gtcggccgggcggtgttccgggatgttttagcaggcggcaaggtggagggcggcagcacg
atcacccagcagctggcgaaaaacatttttctgactcatgataaaacatttttgcgcaag
acgaaggaagtcattatcgccatcaatcttgagcgtgattacagcaaggacaagctgctt
gaaatgtacctgaaccagctttatttcggccatggcgtttacggcattcaagccgcgtcc
cactactactttaataaagaagtaaaagatttaaccgttgcggaaggagccgttctggca
gcgattccgaaggcgccatctctttattcgccgattcagcatccggataaaaataaagaa
cgccgcgatacgattcttgcaatgatgaacgaccaaggctatatcagcgccaaggaagcc
gtcagagcccagggccggacattggggcttaatgtcaagaaaacatcagaaacgccttgg
tttgacagttatatcgatcttgtcatcaaggaggcggaatcccgttattcgatgtcgggt
gaacagctgcttcaaggcggctatacgatccggacgtcacttgattccaagctgcagaaa
acggcatacaccctcatgaaggaaagcggctattttccggggacggatcaggcggcagag
ggaagcgccgtctttattgataataaaaccggaggcgtgcgcgcggcagtcggcggacgc
gactacgtgacaaaaggatacaacagggttacggcgaagcggcagccgggctcaacgttt
aagccgattgccgtatacgggcccgccatgcaggaagacaagttcaaaccgtattcgctt
ctccaagacaaactgacgtcctacgacgggtatgaaccgaaaaattatgacggacagtac
aagggggaagtgacgatgcaggatgcgatcacttacagcataaatgcgcccgctgtctgg
acattgaagcagatcggcgtagatacgggaaaatcgtatcttgagaaaaacggcatgaac
atttctgacaacggactcgcgattgcgcttggcggtctgtcagaaggcgtcaccccgctt
cagcttgccggagcttatcatacctttgcggcaaacggaatgtatacgaagccatttttt
atagagaacatcacggacgaagacggagaaacgttatccgggcccaaaaacggcaaaacg
cgcgtcttcagcggacagacggcatggaatatgacgagaatgcttcagcaggtcgtaaaa
gaaggaaccgcttcacaaggcagctatcaaggtgacctggcggggaaaaccggcacgacc
acatttcccggcgtccccggcgcgacaaaggacgcctggtttgcaggatacactcccgga
ctgacgggagccgtctggatgggctatgacaaaacggataaaacccattacctgaaaggc
ggaagccaatacccggtcagactctttaaagatatcgtcacaaaagcgggggaaaacggc
cggacattcaaaaagcctgaaaatgtgaaggaactgggcagcccgattgagctggaggcg
gtaaagtccctgtcggcccgttatacatttaaggcgatgggactgattacggttcaatta
aaatgggatattcaaaaggatgatcgggttgtttaccgaatatatgagaagaaagacgga
aaagacaaacttctggattcggtgaaaggaaaaggcagctttgacataccgtacgccaat
ctgttttcaggggcttcatacaaagtcgttccatataattcacagacggatcaagaagga
gagggaacggaatacgttcagccgaagcttttttcttcttaa
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