Bacillus velezensis UCMB5113: BASU_1018
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Entry
BASU_1018 CDS
T02796
Symbol
addB
Name
(GenBank) ATP-dependent deoxyribonuclease (subunit B)
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bamn
Bacillus velezensis UCMB5113
Brite
KEGG Orthology (KO) [BR:
bamn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamn03400
]
BASU_1018 (addB)
Enzymes [BR:
bamn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BASU_1018 (addB)
DNA repair and recombination proteins [BR:
bamn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BASU_1018 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CDG25316
LinkDB
All DBs
Position
1042775..1046275
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AA seq
1166 aa
AA seq
DB search
MGVEFLVGRSGSGKTRLIIDSIQDELRREPFGKPIIFLVPDQMTFLMEYELAKTPDIGGM
IRAQVFSFSRLAWRVLQHTGGMNRPFVTTTGVQMLLRKLIEEHKHEFKVYQKASDKTGFT
EQVERMLTEFKRYCIEPEDVRRMAESGTASEYRGERMLSEKLHDLGILYQQMERSLAGHY
LHSEDYLTLLAQQIPLADVVKGARVYVDGFYQFTPQELRVLEQLIMHAEHVTFSLTADSP
SAEQAPDELDLFRMTGSTYYKLYQTAKELNADISCKELHGTKRHQYAPELACIESQYDVR
PAAAYTGGQEAFTVMQAQNRRAELEGIAREIQSLVRDGGYRYKDMAILIRQPEDYKDLLK
EVFADYGLPYFIDGKASMQHHPLIEFIRSSLDVVKGNWRYEAVFRCAKTELLFPLDQPEQ
KIREQVDQLENYCIAYGVKGERWTNGERFVYRRFVSLDEDFAQTDQEIEMEHMLNETKEW
MAAPLVRLQNRMKKAKTVQSMAEALYLFLEDTDVPLKLDRKRQRAEEAGNMIEAQQHGQA
WDAVIQLLEEFAGMMGEDEISLALFQQMLETGTESLHFSLIPPALDQVFVGNMDLSRMYG
TSCTFVIGANDGVLPARPDENGVLSDDDREWLKAVGVELSSAGRERLLDEHFLIYMALSS
PSDRLYVSYPIADAEGKTLLPSIVVNRLGELFPDHQEKLSAADPEQVSEAEQLQYLVNKQ
VAQTYTASQLRLWTREYEISDVWWSAYNVLMKEPDHQRAKKLFSSLFFRNEAKRLERSVS
RQLYGEHIKGSVSRMEAFNACQFSHFASHGLQLKERQFFKLDAPDIGQLFHSSLKLISDR
LREQKLEWRDLTKDQCQNFSYEAVERLAPKLQKEILLSSNRHFYVKEKLQKIVTRVSGIL
SEHARASGFVPVGLELGFGGSGPLPPLTFTLKNGCTMELVGRIDRVDKAESSKGLLLRIV
DYKSSDRGLDLAEVYYGLALQMLTYLDLSITHSEDWLGMKATPAGVLYFHIHDPMIQASL
PMGLDEIEQEIFKKFKMKGLLLGDREAISLMDTTLEEGRSNIVNAGLKKDGSLRSDSAAV
SERDFHLLTDHVRRTFEQAGEAITDGLVSITPYKLKDKTPCTYCAFQSVCQFDESLKENE
YRSLKAEKDGTILDWLKKEADDDANS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
ttgggtgttgagtttttagtaggcagatcggggagtgggaaaacgaggctgattatcgac
agcattcaagatgaactgcgccgggagccgttcgggaaaccgatcatttttctagtcccg
gatcaaatgacgtttttaatggaatatgagcttgctaaaacgccggatatcggcggcatg
atacgcgctcaagtgttcagtttttcgcgtttggcgtggcgcgtgcttcagcataccggg
ggcatgaaccgcccgtttgtgacgacgacgggtgtgcagatgcttttaaggaaattgatt
gaagaacataagcacgagtttaaagtgtatcaaaaagcgagtgacaaaaccgggttcact
gagcaggtggaacggatgctgacagagtttaagcggtactgtattgagcctgaagacgtc
cgccgcatggcggaaagcggaacggcgtcagaatatcgcggagagcggatgctgtctgaa
aaacttcatgatttaggcattttatatcagcagatggaaagaagcctcgccggacactat
ttgcattcagaggattatttgacgctgctcgctcagcagattcctttggcggacgttgta
aaaggcgcccgtgtttacgtcgacggattctatcaatttacgccgcaggaattaagggtg
ctggagcagctgatcatgcatgctgaacatgtcacattctcgctgacggcggacagccct
tcggcggaacaggcaccggatgagctcgatctgttcagaatgacgggaagcacatactat
aagctttatcagacggcaaaggaattgaatgccgatatttcctgcaaggaactgcatggc
acgaagcggcatcagtatgcgccggagcttgcctgtatagagtctcagtacgatgtgcgt
cccgccgcggcgtataccggcggacaggaagcttttaccgtcatgcaggcgcaaaacaga
agagctgagcttgaaggtattgcccgggaaattcaatcacttgtccgggatggaggatac
cggtacaaagatatggcgattctcatccgtcagccggaagattataaagatttgctgaag
gaagtgtttgccgattacgggcttccttattttattgacggaaaggcttctatgcagcat
cacccgcttattgaattcatccgttcaagcctggatgtcgtgaaggggaactggagatat
gaagcagtgttccgctgtgcgaaaaccgaactgttattcccgcttgatcagccggagcag
aaaataagggagcaggtcgatcagcttgaaaattactgtatcgcctatggcgttaaaggg
gagcgctggacgaacggcgagcggtttgtatacaggcgcttcgtatcgctcgatgaggat
ttcgcgcagacggatcaggaaatagagatggagcacatgctgaatgagacgaaagagtgg
atggccgcgccccttgtccggcttcaaaaccggatgaaaaaggcgaaaacggttcaaagc
atggcggaggctctttatctctttttggaagataccgatgttcccctgaagctggaccgg
aaaaggcagcgggcggaagaggccggaaacatgatcgaagcgcagcagcacggccaggcg
tgggatgccgttatccagcttctcgaggagtttgccggcatgatgggtgaagatgaaata
tctttggcgctgttccagcaaatgcttgaaacgggaacggaatcgcttcatttttcttta
attccgcctgcgcttgaccaagtatttgtagggaatatggatctctcaagaatgtacggc
acgtcctgcacattcgtcatcggggccaatgacggcgttcttccggcgcgcccggatgaa
aacggcgtgctgtctgatgatgaccgggagtggctgaaagcggtcggagtggagctgtct
tccgcggggcgtgagcggctgcttgatgagcattttctcatctatatggcgctgtcgagt
ccgtctgaccgtctttatgtatcatacccgattgccgatgcggaaggaaaaacgctcctg
ccgtcaatcgttgtaaacaggcttggcgagctgtttcccgatcatcaggaaaagctgtca
gcggctgatcccgagcaggtaagcgaagcagagcagcttcagtatctcgtcaataaacag
gtggctcagacatatacggcaagccagctcaggctgtggacaagagagtacgagatcagt
gacgtatggtggagcgcatacaatgtgctgatgaaagagcctgatcaccagcgtgcgaaa
aagctgttttcaagcctgtttttccgcaatgaggcgaagcgtcttgaacggtctgtttcg
cgccagctttacggcgagcatattaaaggaagcgtctcccggatggaggcgtttaatgcc
tgccagttttctcattttgcatctcacgggcttcaattaaaagagcggcagtttttcaag
ctggacgcgcctgatatcggccagctgtttcactccagcctgaagctgatttcagaccgg
cttcgtgagcagaagctggaatggcgcgatctgacgaaagatcagtgccagaatttctcc
tatgaagcggtggaacggcttgcgccaaagctgcaaaaagagattctgctcagctcaaac
agacacttttatgtgaaggaaaaactgcagaagatcgtcacgcgtgtttcaggcatatta
agcgagcatgcgagggcgagcggtttcgtcccggtcggtcttgaactcggtttcggcgga
agcgggccgctgcctccgctcactttcacgctgaaaaacggctgtacgatggaactcgtc
ggacggatcgaccgcgtggataaagcggaaagttcaaaaggcctgctgctgagaatcgtt
gattataaatcaagcgacagggggcttgatctggctgaggtgtattacgggctcgctctg
caaatgctcacatatcttgacttatcgattacacattccgaagattggctcggtatgaaa
gcgaccccggcaggcgttttgtatttccatattcatgatccgatgattcaggccagtctg
ccgatggggcttgatgaaatcgagcaggaaatttttaagaaatttaaaatgaaaggcctt
ctcctcggtgaccgggaggcgatcagcctgatggacacgactttggaggaagggcgttca
aatatcgtcaatgccggtttgaaaaaggacggttctttaagatccgactcagccgcggtc
agcgaacgggattttcatctgctgacagaccatgtgcggcggacatttgaacaggcgggc
gaagcgataacggacgggcttgtgtccattaccccgtataagctgaaagataagacgcct
tgtacgtactgtgcgtttcaatcggtgtgccagtttgatgagtcgcttaaggaaaatgaa
taccgcagcctgaaagcggaaaaagacggcaccatactggattggctgaagaaggaggcg
gatgatgatgcaaattcctaa
DBGET
integrated database retrieval system
