Bacillus velezensis UCMB5113: BASU_1407
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Entry
BASU_1407 CDS
T02796
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bamn
Bacillus velezensis UCMB5113
Pathway
bamn00010
Glycolysis / Gluconeogenesis
bamn00020
Citrate cycle (TCA cycle)
bamn00260
Glycine, serine and threonine metabolism
bamn00280
Valine, leucine and isoleucine degradation
bamn00310
Lysine degradation
bamn00380
Tryptophan metabolism
bamn00620
Pyruvate metabolism
bamn00630
Glyoxylate and dicarboxylate metabolism
bamn00640
Propanoate metabolism
bamn00670
One carbon pool by folate
bamn00785
Lipoic acid metabolism
bamn01100
Metabolic pathways
bamn01110
Biosynthesis of secondary metabolites
bamn01120
Microbial metabolism in diverse environments
bamn01200
Carbon metabolism
bamn01210
2-Oxocarboxylic acid metabolism
bamn01240
Biosynthesis of cofactors
Module
bamn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bamn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bamn_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
bamn_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bamn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
BASU_1407 (pdhD)
00020 Citrate cycle (TCA cycle)
BASU_1407 (pdhD)
00620 Pyruvate metabolism
BASU_1407 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
BASU_1407 (pdhD)
00640 Propanoate metabolism
BASU_1407 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BASU_1407 (pdhD)
00280 Valine, leucine and isoleucine degradation
BASU_1407 (pdhD)
00310 Lysine degradation
BASU_1407 (pdhD)
00380 Tryptophan metabolism
BASU_1407 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BASU_1407 (pdhD)
00670 One carbon pool by folate
BASU_1407 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bamn04147
]
BASU_1407 (pdhD)
Enzymes [BR:
bamn01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
BASU_1407 (pdhD)
Exosome [BR:
bamn04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
BASU_1407 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_binding_2
FAD_oxidored
HI0933_like
FAD_binding_3
NAD_binding_8
NAD_binding_9
AlaDh_PNT_C
Amino_oxidase
UDPG_MGDP_dh_N
DAO
Tox-PAAR-like
Thi4
Lys_Orn_oxgnase
3HCDH_N
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
CDG25701
LinkDB
All DBs
Position
1453091..1454503
Genome browser
AA seq
470 aa
AA seq
DB search
MVVGDFPIETDTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALIN
AGHRYENAKHSDDMGITAENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVIKGEAY
FVDSNSVRVMDENSAQTYTFKNAIIATGSRPIELPNFKYSERVLNSTGALALKEIPKKLV
VIGGGYIGTELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAM
AKGVEERPDGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTD
KQCRTNVPNIYAIGDIIDGPPLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELA
SVGYTEAQAKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASA
SDMISELSLAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggtagtaggagatttccctattgaaacagatactcttgtgattggtgcgggacccggc
ggctatgtagctgccatccgcgctgctcagcttggacaaaaagtaacagtcgttgaaaaa
gcaactcttggaggcgtttgtctgaacgtcggctgtattccttcaaaagcgctcattaat
gcaggccatcgttacgagaatgcaaaacattcagatgacatgggaatcactgctgagaac
gtaacggttgactttacaaaagtccaagaatggaaagcttctgttgtaaataagcttacc
ggcggtgttgcaggtcttttaaaaggaaataaagtggatgttataaaaggggaagcttat
ttcgtagacagcaactctgtccgtgtaatggatgagaactctgcgcaaacatacacattt
aaaaacgcaatcattgctaccggttctcgccctatcgaattgccaaacttcaaatatagc
gaacgcgttctgaactctacaggcgcacttgcgcttaaagaaattccgaaaaagctcgtt
gttatcggcggcggatatatcggtactgagcttggaacagcgtatgcgaacttcggaact
gaattggttattttagaaggcggagatgaaattcttcctggcttcgaaaaacaaatgagt
tctctcgttacccgcagactgaagaaaaaaggcaacgttgaaatccatacaagcgccatg
gctaaaggcgttgaggaaagacctgacggcgtaacagttacattcgaagtaaaaggcgaa
gaaaaaacggttgatgctgattacgtattaatcactgtcggacgccgtccgaacactgat
gagctcggccttgagcaagtcggtatcgaaatgactgaccgcggtgtcattaaaacagac
aagcagtgccgcacaaacgtaccgaacatttacgcaatcggtgacatcattgacggacct
ccgttggctcacaaagcgtcttacgaaggtaaaatcgctgccgaagctatttcaggagag
ccggctgaaatcgattacctcggtattccggcggttgtattctctgagcctgaactggct
tctgtcggttacactgaagcacaggcgaaagaagaaggcattgaagtcgttgcagctaag
ttcccgtttgcagcaaacggacgtgcgctgtctcttaacgaaactgacggcttcatgaag
ctgatcactcgtaaagaagacggtcttgtaatcggtgcgcaaattgccggcgcaagcgct
tctgacatgatttctgaattgagcctggcgatcgaaggcggaatgactgctgaagatatc
gcaatgacaattcacgctcacccgacattgggcgaaatcactatggaagctgccgaagta
gcaatcggaagcccgatccatatcgtgaaataa
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