Bacillus velezensis UCMB5113: BASU_2045
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Entry
BASU_2045 CDS
T02796
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bamn
Bacillus velezensis UCMB5113
Pathway
bamn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bamn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BASU_2045 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bamn03019
]
BASU_2045 (recQ)
03400 DNA repair and recombination proteins [BR:
bamn03400
]
BASU_2045 (recQ)
Enzymes [BR:
bamn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BASU_2045 (recQ)
Messenger RNA biogenesis [BR:
bamn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BASU_2045 (recQ)
DNA repair and recombination proteins [BR:
bamn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BASU_2045 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
PreAtp-grasp
Motif
Other DBs
NCBI-ProteinID:
CDG26337
LinkDB
All DBs
Position
complement(2196353..2197771)
Genome browser
AA seq
472 aa
AA seq
DB search
MTSVLQKKDTIAMLPTGGGKSLCYQLPGYMMDGLVLIISPLLSLMEDQVQQLKAKGEKRV
AALNSMLNSAERHFILSNISRYKFLYMSPEALSSPYVLNRLKNVPVSLFVIDEAHCISEW
GHDFRPDYSKLGPFRQALGKPPVLALTATATKETLRDVTDVLGLEHAVRHLYSVNRPNIL
LAAEHLADNAEKISRLTELAEKLEGPGIIYCPTRKWAEELAAELNEKTGKRTDYYHGGMD
TGDRILIQQQFIHNQLDCICCTNAFGMGVDKSDIRFVIHFYPPQTAEAFMQEIGRAGRDS
SPSVSILLRTPGDTELQQQIIQTESLSDYDLEGILAVIRDAGTGDERKLRDVLINKGVQE
TQARTAVHLYLQGKTTKEQLQEELTYRVEKKLRKMNRFSALLERKECIREALLSYFDEPY
EPDGQTGQCCSSCGLDLAPYEQKGERKNMERFEDWKLELGRIFGSESAGEFS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgactagcgtgctccaaaaaaaggatacgatcgccatgcttccgaccggcgggggaaaa
tcattatgctatcagctcccaggttacatgatggacgggctggtgctgattatttcgccg
ctcctttcattaatggaagatcaggtgcagcagctgaaagcgaaaggagaaaagcgggtt
gcggcattaaacagcatgctgaattccgcagagcggcattttatcctcagcaacatcagc
cggtataaatttctctatatgtctcctgaagccctttcttcaccttatgtgctgaaccgt
ttgaaaaatgtcccggtcagtttatttgttattgatgaggctcattgcatatcagaatgg
ggacatgatttcaggcctgattattcgaagctcgggcccttcaggcaggcactcggaaag
ccgcctgtattggcgctgaccgcaacagcgacaaaagaaacgctcagagacgtgacggat
gtgctcggacttgagcatgcggtgcgtcatctttattcagtcaaccggccgaatattctc
ctggcggcagaacatttggcggataatgccgagaaaataagcaggctcacggagcttgcc
gaaaagcttgaaggtccgggtatcatatattgtccgaccagaaaatgggcggaagagctt
gcggctgagctgaacgaaaaaacgggaaagcggacggattattatcacggcggaatggat
acaggcgacaggattttaatccagcagcaatttatccataaccagcttgattgcatctgc
tgcaccaatgcgttcggcatgggggtggataagtcagatatccgctttgtcattcacttt
tatcctccccaaacggccgaggcctttatgcaggaaatcggcagagcgggacgagacagc
agcccgagtgtcagtattttgctgaggacgcccggcgataccgagcttcagcagcagatt
attcagacagaaagcctgtctgattatgacctggaaggcattctggccgtcatacgggat
gccggtacgggtgatgagcgaaagcttcgggacgttctgatcaataagggcgtccaggaa
acacaggcgcgaacggccgttcatctgtatctgcaaggaaaaaccacaaaagagcagctg
caggaagaactgacataccgcgtggaaaagaagctgcgtaaaatgaatcgtttttcggcg
ttattagagcggaaagaatgtataagagaagcgctgctgtcttattttgatgaaccgtat
gagcctgatggtcaaaccggacaatgctgcagcagctgcggacttgatctggctccgtac
gagcaaaaaggagaacgtaaaaacatggaacggtttgaagattggaagttggaattaggc
cggattttcggttcagagtctgcgggtgagttcagctga
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