Bacillus velezensis UCMB5113: BASU_2267
Help
Entry
BASU_2267 CDS
T02796
Symbol
cshB
Name
(GenBank) ATP-dependent RNA helicase; cold shock
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bamn
Bacillus velezensis UCMB5113
Brite
KEGG Orthology (KO) [BR:
bamn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bamn03019
]
BASU_2267 (cshB)
03009 Ribosome biogenesis [BR:
bamn03009
]
BASU_2267 (cshB)
Enzymes [BR:
bamn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BASU_2267 (cshB)
Messenger RNA biogenesis [BR:
bamn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BASU_2267 (cshB)
Ribosome biogenesis [BR:
bamn03009
]
Prokaryotic type
rRNA helicases
BASU_2267 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CDG26558
LinkDB
All DBs
Position
complement(2446576..2447892)
Genome browser
AA seq
438 aa
AA seq
DB search
MKETKFDGYNLKPFIIDAVHRLGFYEPTDIQKRLIPAVLKNESVIGQSQTGTGKTHAYLL
PILNRIDPGSDTVQAVITAPTRELANQIHQEALKITQGAEDEPIRTKCFIGGTDKQKSID
KLKTQPHLVVGTPGRIADLIKAQALNVYKAQSLVIDEADLMLDMGFLEDVDYIGSRMPEE
LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKRITAEKIEHVLVPSKQRDKDKLLFDMM
SHLNPYLGIVFANTKNTADHIAKYLTEKGMRIGLLHGGLTPRERKKVMKQINDLEFTYVI
ATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQALTIYELSDEDALVRL
EKMGIVFDYAELVNGEWKKGDDRHRRKKRKKSENEADQMAKRLVKKPKKVKPGYKKKMSY
EMEKIKRKQRRNKSNKGK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaactaaatttgatggatacaacttaaaaccgtttattatagatgcagttcac
cgccttggtttttatgaaccgacagatattcaaaagcgtctgatacctgccgtactgaaa
aacgaaagcgtgatcgggcagtcccagacggggacggggaaaacccacgcctatttattg
ccaattttgaatcggattgatccgggttctgatacggtacaggctgttatcacggcgccg
acgagagagcttgccaatcagattcatcaggaagcactcaaaatcacacagggtgcggaa
gatgagccgatccggacaaaatgcttcatcggcgggacggacaagcaaaaatcaattgat
aagctgaaaacacagcctcatctcgtcgtcggaacgccgggccggatcgcggatctgatt
aaggcgcaggcattgaacgtctataaagcgcagtctctcgtcattgacgaagctgatctg
atgcttgatatgggctttttagaagacgttgattatatcggatcgcgtatgccggaagaa
ctgcagatgcttgtgttctcagctacgattccggaaaagctgaagccgtttttgaaaaag
tatatggaaaatccgaagtacgcgcatgttgagccgaaaagaatcacagccgaaaagatt
gaacatgtgttggttccttctaaacagcgtgataaagacaaactgctttttgatatgatg
tctcatctgaatccttatctgggcattgtgtttgcaaatacgaaaaacacggctgaccat
attgcgaaatacctgactgaaaagggcatgaggatcggtcttctgcacgggggattaacg
ccgcgtgagcgtaagaaggtaatgaagcagattaatgatctggaattcacttatgtcatt
gcgacagaccttgcggcaagaggaattgacattaaaggcgtaagtcacgtcatcaactat
gagcttccggacgatctggatttttatgttcaccgcgtcgggagaaccgcacgcgcgggt
tcatcaggccaagcactgaccatttatgagctttctgacgaagatgcgctcgtaagactc
gaaaagatgggtattgtgtttgactatgcggagcttgtaaacggcgaatggaagaaaggc
gatgaccgccaccgccgcaaaaaacgcaaaaaatcggagaatgaggccgaccaaatggcg
aagcgcctcgtgaaaaaaccaaaaaaagtgaagccgggctataaaaagaaaatgagctac
gaaatggaaaagataaaaagaaagcagagaagaaacaaatctaacaaaggaaagtag
DBGET
integrated database retrieval system
